Gene : Sobic.001G104900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31412//PTHR31412:SF2 - FAMILY NOT NAMED // ZINC METALLOPEPTIDASE EGY3, CHLOROPLASTIC-RELATED Genomic Order:  1082
Name:  ? Sobic.001G104900 Secondary Identifier:  ? PAC:37941372
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G104900 0.5kb upstream 0.5kb upstream 3276 true Chr01: 8033652-8036927 Sorghum bicolor
Sobic.001G104900 0.5kb upstream 0.5kb upstream 500 false Chr01: 8033652-8034151 Sorghum bicolor
Sobic.001G104900 0.5kb downstream 0.5kb downstream 3276 true Chr01: 8034152-8037427 Sorghum bicolor
Sobic.001G104900 0.5kb downstream 0.5kb downstream 500 false Chr01: 8036928-8037427 Sorghum bicolor
Sobic.001G104900 1.0kb upstream 1.0kb upstream 3776 true Chr01: 8033152-8036927 Sorghum bicolor
Sobic.001G104900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8033152-8034151 Sorghum bicolor
Sobic.001G104900 1.0kb downstream 1.0kb downstream 3776 true Chr01: 8034152-8037927 Sorghum bicolor
Sobic.001G104900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8036928-8037927 Sorghum bicolor
Sobic.001G104900 2.0kb upstream 2.0kb upstream 4776 true Chr01: 8032152-8036927 Sorghum bicolor
Sobic.001G104900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8032152-8034151 Sorghum bicolor
Sobic.001G104900 2.0kb downstream 2.0kb downstream 4776 true Chr01: 8034152-8038927 Sorghum bicolor
Sobic.001G104900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8036928-8038927 Sorghum bicolor
Sobic.001G104900 5.0kb upstream 5.0kb upstream 7776 true Chr01: 8029152-8036927 Sorghum bicolor
Sobic.001G104900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8029152-8034151 Sorghum bicolor
Sobic.001G104900 5.0kb downstream 5.0kb downstream 7776 true Chr01: 8034152-8041927 Sorghum bicolor
Sobic.001G104900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8036928-8041927 Sorghum bicolor
Sobic.001G104900 10.0kb upstream 10.0kb upstream 12776 true Chr01: 8024152-8036927 Sorghum bicolor
Sobic.001G104900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8024152-8034151 Sorghum bicolor
Sobic.001G104900 10.0kb downstream 10.0kb downstream 12776 true Chr01: 8034152-8046927 Sorghum bicolor
Sobic.001G104900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8036928-8046927 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179923 5267 Panicoideae View MSA
124579844 5269 Grass View MSA
122042498 5273 Angiosperm View MSA
121347143 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.048     Low Low
cufflinks 0.614        
cufflinks 0.748        
cufflinks 1.413        
cufflinks 0.837        
cufflinks 1.077        
cufflinks 0.591        
cufflinks 3.964       High
cufflinks 0.808        
cufflinks 0.364        
cufflinks 0.06     Low Low
cufflinks 0.184        
cufflinks 0.301        
cufflinks 0.117       Low
cufflinks 0.699        
cufflinks 0.931        
cufflinks 0.689        
cufflinks 0.569        
cufflinks 1.226        
cufflinks 2.968       High
cufflinks 0.842        
cufflinks 0.067     Low Low
cufflinks 0.129       Low
cufflinks 0.169        
cufflinks 10.853     High High
cufflinks 13.066     High High
cufflinks 0.093     Low Low
cufflinks 8.319       High
cufflinks 0.19        
cufflinks 1.543        

0 Strain