Gene : Sobic.001G103900 S. bicolor v3.1.1
Defline:  (1 of 4) KOG2443 - Uncharacterized conserved protein Genomic Order:  1071
Name:  ? Sobic.001G103900 Secondary Identifier:  ? PAC:37941317
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G103900 0.5kb upstream 0.5kb upstream 6285 true Chr01: 7968936-7975220 Sorghum bicolor
Sobic.001G103900 0.5kb upstream 0.5kb upstream 500 false Chr01: 7968936-7969435 Sorghum bicolor
Sobic.001G103900 0.5kb downstream 0.5kb downstream 6285 true Chr01: 7969436-7975720 Sorghum bicolor
Sobic.001G103900 0.5kb downstream 0.5kb downstream 500 false Chr01: 7975221-7975720 Sorghum bicolor
Sobic.001G103900 1.0kb upstream 1.0kb upstream 6785 true Chr01: 7968436-7975220 Sorghum bicolor
Sobic.001G103900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 7968436-7969435 Sorghum bicolor
Sobic.001G103900 1.0kb downstream 1.0kb downstream 6785 true Chr01: 7969436-7976220 Sorghum bicolor
Sobic.001G103900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 7975221-7976220 Sorghum bicolor
Sobic.001G103900 2.0kb upstream 2.0kb upstream 7785 true Chr01: 7967436-7975220 Sorghum bicolor
Sobic.001G103900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 7967436-7969435 Sorghum bicolor
Sobic.001G103900 2.0kb downstream 2.0kb downstream 7785 true Chr01: 7969436-7977220 Sorghum bicolor
Sobic.001G103900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 7975221-7977220 Sorghum bicolor
Sobic.001G103900 5.0kb upstream 5.0kb upstream 10785 true Chr01: 7964436-7975220 Sorghum bicolor
Sobic.001G103900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 7964436-7969435 Sorghum bicolor
Sobic.001G103900 5.0kb downstream 5.0kb downstream 10785 true Chr01: 7969436-7980220 Sorghum bicolor
Sobic.001G103900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 7975221-7980220 Sorghum bicolor
Sobic.001G103900 10.0kb upstream 10.0kb upstream 15785 true Chr01: 7959436-7975220 Sorghum bicolor
Sobic.001G103900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 7959436-7969435 Sorghum bicolor
Sobic.001G103900 10.0kb downstream 10.0kb downstream 15785 true Chr01: 7969436-7985220 Sorghum bicolor
Sobic.001G103900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 7975221-7985220 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184597 5267 Panicoideae View MSA
124584629 5269 Grass View MSA
122042427 5273 Angiosperm View MSA
121351308 5274 Embryophyte View MSA
123428175 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.255       High
cufflinks 1.601       Low
cufflinks 3.459        
cufflinks 6.181        
cufflinks 5.466        
cufflinks 5.183        
cufflinks 4.287        
cufflinks 2.629       Low
cufflinks 5.41        
cufflinks 6.027        
cufflinks 6.193        
cufflinks 6.338        
cufflinks 5.632        
cufflinks 8.13        
cufflinks 6.774        
cufflinks 3.401        
cufflinks 4.658        
cufflinks 4.976        
cufflinks 3.446        
cufflinks 5.039        
cufflinks 4.85        
cufflinks 8.965       High
cufflinks 8.555       High
cufflinks 8.408       High
cufflinks 3.218       Low
cufflinks 1.248       Low
cufflinks 5.715        
cufflinks 4.797        
cufflinks 6.209        
cufflinks 9.329       High

0 Strain