Gene : Sobic.001G096300 S. bicolor v3.1.1
Defline:  (1 of 2) K00809 - deoxyhypusine synthase (DHPS, dys) Genomic Order:  990
Name:  ? Sobic.001G096300 Secondary Identifier:  ? PAC:37940159
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-5905 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G096300 0.5kb upstream 0.5kb upstream 4992 true Chr01: 7399446-7404437 Sorghum bicolor
Sobic.001G096300 0.5kb upstream 0.5kb upstream 500 false Chr01: 7403938-7404437 Sorghum bicolor
Sobic.001G096300 0.5kb downstream 0.5kb downstream 4992 true Chr01: 7398946-7403937 Sorghum bicolor
Sobic.001G096300 0.5kb downstream 0.5kb downstream 500 false Chr01: 7398946-7399445 Sorghum bicolor
Sobic.001G096300 1.0kb upstream 1.0kb upstream 5492 true Chr01: 7399446-7404937 Sorghum bicolor
Sobic.001G096300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 7403938-7404937 Sorghum bicolor
Sobic.001G096300 1.0kb downstream 1.0kb downstream 5492 true Chr01: 7398446-7403937 Sorghum bicolor
Sobic.001G096300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 7398446-7399445 Sorghum bicolor
Sobic.001G096300 2.0kb upstream 2.0kb upstream 6492 true Chr01: 7399446-7405937 Sorghum bicolor
Sobic.001G096300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 7403938-7405937 Sorghum bicolor
Sobic.001G096300 2.0kb downstream 2.0kb downstream 6492 true Chr01: 7397446-7403937 Sorghum bicolor
Sobic.001G096300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 7397446-7399445 Sorghum bicolor
Sobic.001G096300 5.0kb upstream 5.0kb upstream 9492 true Chr01: 7399446-7408937 Sorghum bicolor
Sobic.001G096300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 7403938-7408937 Sorghum bicolor
Sobic.001G096300 5.0kb downstream 5.0kb downstream 9492 true Chr01: 7394446-7403937 Sorghum bicolor
Sobic.001G096300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 7394446-7399445 Sorghum bicolor
Sobic.001G096300 10.0kb upstream 10.0kb upstream 14492 true Chr01: 7399446-7413937 Sorghum bicolor
Sobic.001G096300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 7403938-7413937 Sorghum bicolor
Sobic.001G096300 10.0kb downstream 10.0kb downstream 14492 true Chr01: 7389446-7403937 Sorghum bicolor
Sobic.001G096300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 7389446-7399445 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193451 5267 Panicoideae View MSA
124570827 5269 Grass View MSA
122048082 5273 Angiosperm View MSA
121345605 5274 Embryophyte View MSA
123427897 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.035        
cufflinks 3.064       Low
cufflinks 5.728        
cufflinks 7.997        
cufflinks 7.944        
cufflinks 8.802        
cufflinks 4.934        
cufflinks 6.367        
cufflinks 10.393       High
cufflinks 12.459     High High
cufflinks 6.479        
cufflinks 5.172        
cufflinks 9.441       High
cufflinks 6.234        
cufflinks 7.082        
cufflinks 4.713       Low
cufflinks 4.737       Low
cufflinks 5.818        
cufflinks 4.329       Low
cufflinks 5.244        
cufflinks 6.344        
cufflinks 9.088       High
cufflinks 6.364        
cufflinks 6.325        
cufflinks 2.829       Low
cufflinks 4.1       Low
cufflinks 6.008        
cufflinks 5.37        
cufflinks 6.856        
cufflinks 6.989        

0 Strain