Gene : Sobic.001G219900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12596:SF1 - EXPORTIN-4 Genomic Order:  2280
Name:  ? Sobic.001G219900 Secondary Identifier:  ? PAC:37944957
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G219900 0.5kb upstream 0.5kb upstream 18466 true Chr01: 20685481-20703946 Sorghum bicolor
Sobic.001G219900 0.5kb upstream 0.5kb upstream 500 false Chr01: 20703447-20703946 Sorghum bicolor
Sobic.001G219900 0.5kb downstream 0.5kb downstream 18466 true Chr01: 20684981-20703446 Sorghum bicolor
Sobic.001G219900 0.5kb downstream 0.5kb downstream 500 false Chr01: 20684981-20685480 Sorghum bicolor
Sobic.001G219900 1.0kb upstream 1.0kb upstream 18966 true Chr01: 20685481-20704446 Sorghum bicolor
Sobic.001G219900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 20703447-20704446 Sorghum bicolor
Sobic.001G219900 1.0kb downstream 1.0kb downstream 18966 true Chr01: 20684481-20703446 Sorghum bicolor
Sobic.001G219900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 20684481-20685480 Sorghum bicolor
Sobic.001G219900 2.0kb upstream 2.0kb upstream 19966 true Chr01: 20685481-20705446 Sorghum bicolor
Sobic.001G219900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 20703447-20705446 Sorghum bicolor
Sobic.001G219900 2.0kb downstream 2.0kb downstream 19966 true Chr01: 20683481-20703446 Sorghum bicolor
Sobic.001G219900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 20683481-20685480 Sorghum bicolor
Sobic.001G219900 5.0kb upstream 5.0kb upstream 22966 true Chr01: 20685481-20708446 Sorghum bicolor
Sobic.001G219900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 20703447-20708446 Sorghum bicolor
Sobic.001G219900 5.0kb downstream 5.0kb downstream 22966 true Chr01: 20680481-20703446 Sorghum bicolor
Sobic.001G219900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 20680481-20685480 Sorghum bicolor
Sobic.001G219900 10.0kb upstream 10.0kb upstream 27966 true Chr01: 20685481-20713446 Sorghum bicolor
Sobic.001G219900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 20703447-20713446 Sorghum bicolor
Sobic.001G219900 10.0kb downstream 10.0kb downstream 27966 true Chr01: 20675481-20703446 Sorghum bicolor
Sobic.001G219900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 20675481-20685480 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041048 5273 Angiosperm View MSA
122179340 5267 Panicoideae View MSA
124584460 5269 Grass View MSA
121344332 5274 Embryophyte View MSA
123425347 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.022       Low
cufflinks 0.56       Low
cufflinks 1.162        
cufflinks 1.505        
cufflinks 3.052        
cufflinks 2.01        
cufflinks 1.479        
cufflinks 0.857       Low
cufflinks 3.004        
cufflinks 3.004        
cufflinks 2.695        
cufflinks 2.645        
cufflinks 2.009        
cufflinks 2.911        
cufflinks 1.969        
cufflinks 0.728       Low
cufflinks 1.307        
cufflinks 1.525        
cufflinks 0.94       Low
cufflinks 1.622        
cufflinks 3.73       High
cufflinks 4.123       High
cufflinks 2.735        
cufflinks 2.947        
cufflinks 1.249        
cufflinks 0.648       Low
cufflinks 2.328        
cufflinks 0.842       Low
cufflinks 1.645        
cufflinks 2.747        

0 Strain