Gene : Sobic.001G208300 S. bicolor v3.1.1
Defline:  (1 of 65) PF00149 - Calcineurin-like phosphoesterase (Metallophos) Genomic Order:  2169
Name:  ? Sobic.001G208300 Secondary Identifier:  ? PAC:37943675
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G208300 0.5kb upstream 0.5kb upstream 4656 true Chr01: 19076246-19080901 Sorghum bicolor
Sobic.001G208300 0.5kb upstream 0.5kb upstream 500 false Chr01: 19076246-19076745 Sorghum bicolor
Sobic.001G208300 0.5kb downstream 0.5kb downstream 4656 true Chr01: 19076746-19081401 Sorghum bicolor
Sobic.001G208300 0.5kb downstream 0.5kb downstream 500 false Chr01: 19080902-19081401 Sorghum bicolor
Sobic.001G208300 1.0kb upstream 1.0kb upstream 5156 true Chr01: 19075746-19080901 Sorghum bicolor
Sobic.001G208300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 19075746-19076745 Sorghum bicolor
Sobic.001G208300 1.0kb downstream 1.0kb downstream 5156 true Chr01: 19076746-19081901 Sorghum bicolor
Sobic.001G208300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 19080902-19081901 Sorghum bicolor
Sobic.001G208300 2.0kb upstream 2.0kb upstream 6156 true Chr01: 19074746-19080901 Sorghum bicolor
Sobic.001G208300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 19074746-19076745 Sorghum bicolor
Sobic.001G208300 2.0kb downstream 2.0kb downstream 6156 true Chr01: 19076746-19082901 Sorghum bicolor
Sobic.001G208300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 19080902-19082901 Sorghum bicolor
Sobic.001G208300 5.0kb upstream 5.0kb upstream 9156 true Chr01: 19071746-19080901 Sorghum bicolor
Sobic.001G208300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 19071746-19076745 Sorghum bicolor
Sobic.001G208300 5.0kb downstream 5.0kb downstream 9156 true Chr01: 19076746-19085901 Sorghum bicolor
Sobic.001G208300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 19080902-19085901 Sorghum bicolor
Sobic.001G208300 10.0kb upstream 10.0kb upstream 14156 true Chr01: 19066746-19080901 Sorghum bicolor
Sobic.001G208300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 19066746-19076745 Sorghum bicolor
Sobic.001G208300 10.0kb downstream 10.0kb downstream 14156 true Chr01: 19076746-19090901 Sorghum bicolor
Sobic.001G208300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 19080902-19090901 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175233 5267 Panicoideae View MSA
124569509 5269 Grass View MSA
122048487 5273 Angiosperm View MSA
121348333 5274 Embryophyte View MSA
123425755 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.6        
cufflinks 1.94       Low
cufflinks 1.543       Low
cufflinks 1.761       Low
cufflinks 5.1        
cufflinks 3.335        
cufflinks 4.242        
cufflinks 7.243       High
cufflinks 3.222        
cufflinks 3.016        
cufflinks 7.471       High
cufflinks 4.042        
cufflinks 4.814        
cufflinks 4.905        
cufflinks 3.532        
cufflinks 2.618       Low
cufflinks 4.835        
cufflinks 3.901        
cufflinks 3.172        
cufflinks 4.34        
cufflinks 2.554       Low
cufflinks 5.167        
cufflinks 4.424        
cufflinks 4.222        
cufflinks 1.97       Low
cufflinks 2.056       Low
cufflinks 10.965       High
cufflinks 6.423        
cufflinks 8.106       High
cufflinks 3.893        

0 Strain