Gene : Sobic.001G209400 S. bicolor v3.1.1
Defline:  (1 of 5) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  2180
Name:  ? Sobic.001G209400 Secondary Identifier:  ? PAC:37941448
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G209400 0.5kb upstream 0.5kb upstream 1354 true Chr01: 19157859-19159212 Sorghum bicolor
Sobic.001G209400 0.5kb upstream 0.5kb upstream 500 false Chr01: 19158713-19159212 Sorghum bicolor
Sobic.001G209400 0.5kb downstream 0.5kb downstream 1354 true Chr01: 19157359-19158712 Sorghum bicolor
Sobic.001G209400 0.5kb downstream 0.5kb downstream 500 false Chr01: 19157359-19157858 Sorghum bicolor
Sobic.001G209400 1.0kb upstream 1.0kb upstream 1854 true Chr01: 19157859-19159712 Sorghum bicolor
Sobic.001G209400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 19158713-19159712 Sorghum bicolor
Sobic.001G209400 1.0kb downstream 1.0kb downstream 1854 true Chr01: 19156859-19158712 Sorghum bicolor
Sobic.001G209400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 19156859-19157858 Sorghum bicolor
Sobic.001G209400 2.0kb upstream 2.0kb upstream 2854 true Chr01: 19157859-19160712 Sorghum bicolor
Sobic.001G209400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 19158713-19160712 Sorghum bicolor
Sobic.001G209400 2.0kb downstream 2.0kb downstream 2854 true Chr01: 19155859-19158712 Sorghum bicolor
Sobic.001G209400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 19155859-19157858 Sorghum bicolor
Sobic.001G209400 5.0kb upstream 5.0kb upstream 5854 true Chr01: 19157859-19163712 Sorghum bicolor
Sobic.001G209400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 19158713-19163712 Sorghum bicolor
Sobic.001G209400 5.0kb downstream 5.0kb downstream 5854 true Chr01: 19152859-19158712 Sorghum bicolor
Sobic.001G209400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 19152859-19157858 Sorghum bicolor
Sobic.001G209400 10.0kb upstream 10.0kb upstream 10854 true Chr01: 19157859-19168712 Sorghum bicolor
Sobic.001G209400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 19158713-19168712 Sorghum bicolor
Sobic.001G209400 10.0kb downstream 10.0kb downstream 10854 true Chr01: 19147859-19158712 Sorghum bicolor
Sobic.001G209400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 19147859-19157858 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192671 5267 Panicoideae View MSA
124585877 5269 Grass View MSA
122049150 5273 Angiosperm View MSA
121350945 5274 Embryophyte View MSA
123381943 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  

0 Strain