Gene : Sobic.001G203400 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR23086:SF42 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 9 Genomic Order:  2114
Name:  ? Sobic.001G203400 Secondary Identifier:  ? PAC:37941002
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6351 Sorghum bicolor pathologic  
Sbicolor PWY-6352 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G203400 0.5kb upstream 0.5kb upstream 6895 true Chr01: 18509797-18516691 Sorghum bicolor
Sobic.001G203400 0.5kb upstream 0.5kb upstream 500 false Chr01: 18516192-18516691 Sorghum bicolor
Sobic.001G203400 0.5kb downstream 0.5kb downstream 6895 true Chr01: 18509297-18516191 Sorghum bicolor
Sobic.001G203400 0.5kb downstream 0.5kb downstream 500 false Chr01: 18509297-18509796 Sorghum bicolor
Sobic.001G203400 1.0kb upstream 1.0kb upstream 7395 true Chr01: 18509797-18517191 Sorghum bicolor
Sobic.001G203400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 18516192-18517191 Sorghum bicolor
Sobic.001G203400 1.0kb downstream 1.0kb downstream 7395 true Chr01: 18508797-18516191 Sorghum bicolor
Sobic.001G203400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 18508797-18509796 Sorghum bicolor
Sobic.001G203400 2.0kb upstream 2.0kb upstream 8395 true Chr01: 18509797-18518191 Sorghum bicolor
Sobic.001G203400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 18516192-18518191 Sorghum bicolor
Sobic.001G203400 2.0kb downstream 2.0kb downstream 8395 true Chr01: 18507797-18516191 Sorghum bicolor
Sobic.001G203400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 18507797-18509796 Sorghum bicolor
Sobic.001G203400 5.0kb upstream 5.0kb upstream 11395 true Chr01: 18509797-18521191 Sorghum bicolor
Sobic.001G203400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 18516192-18521191 Sorghum bicolor
Sobic.001G203400 5.0kb downstream 5.0kb downstream 11395 true Chr01: 18504797-18516191 Sorghum bicolor
Sobic.001G203400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 18504797-18509796 Sorghum bicolor
Sobic.001G203400 10.0kb upstream 10.0kb upstream 16395 true Chr01: 18509797-18526191 Sorghum bicolor
Sobic.001G203400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 18516192-18526191 Sorghum bicolor
Sobic.001G203400 10.0kb downstream 10.0kb downstream 16395 true Chr01: 18499797-18516191 Sorghum bicolor
Sobic.001G203400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 18499797-18509796 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026416 5273 Angiosperm View MSA
122181250 5267 Panicoideae View MSA
124568328 5269 Grass View MSA
121350823 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.202       Low
cufflinks 9.16     High  
cufflinks 4.536       Low
cufflinks 4.252       Low
cufflinks 5.141        
cufflinks 6.318        
cufflinks 9.469        
cufflinks 7.381        
cufflinks 8.867        
cufflinks 8.851        
cufflinks 19.217     High High
cufflinks 24.26     High High
cufflinks 11.782     High  
cufflinks 19.787     High High
cufflinks 7.351        
cufflinks 6.395        
cufflinks 9.232        
cufflinks 8.174        
cufflinks 4.947       Low
cufflinks 7.769        
cufflinks 9.001        
cufflinks 14.917     High  
cufflinks 20.918     High High
cufflinks 20.388     High High
cufflinks 11.765     High  
cufflinks 9.929     High  
cufflinks 12.329     High  
cufflinks 3.016       Low
cufflinks 8.552        
cufflinks 7.215        

0 Strain