Gene : Sobic.003G429200 S. bicolor v3.1.1
Defline:  (1 of 3) 1.6.5.2//1.6.5.3 - NAD(P)H dehydrogenase (quinone) / Vitamin-K reductase // NADH:ubiquinone reductase (H(+)-translocating) / Ubiquinone reductase Genomic Order:  4510
Name:  ? Sobic.003G429200 Secondary Identifier:  ? PAC:37914791
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-3781 Sorghum bicolor pathologic  
Sbicolor PWY-4302 Sorghum bicolor pathologic  
Sbicolor PWY-5083 Sorghum bicolor pathologic  
Sbicolor PWY-7279 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G429200 0.5kb upstream 0.5kb upstream 1511 true Chr03: 73238617-73240127 Sorghum bicolor
Sobic.003G429200 0.5kb upstream 0.5kb upstream 500 false Chr03: 73238617-73239116 Sorghum bicolor
Sobic.003G429200 0.5kb downstream 0.5kb downstream 1511 true Chr03: 73239117-73240627 Sorghum bicolor
Sobic.003G429200 0.5kb downstream 0.5kb downstream 500 false Chr03: 73240128-73240627 Sorghum bicolor
Sobic.003G429200 1.0kb upstream 1.0kb upstream 2011 true Chr03: 73238117-73240127 Sorghum bicolor
Sobic.003G429200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 73238117-73239116 Sorghum bicolor
Sobic.003G429200 1.0kb downstream 1.0kb downstream 2011 true Chr03: 73239117-73241127 Sorghum bicolor
Sobic.003G429200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 73240128-73241127 Sorghum bicolor
Sobic.003G429200 2.0kb upstream 2.0kb upstream 3011 true Chr03: 73237117-73240127 Sorghum bicolor
Sobic.003G429200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 73237117-73239116 Sorghum bicolor
Sobic.003G429200 2.0kb downstream 2.0kb downstream 3011 true Chr03: 73239117-73242127 Sorghum bicolor
Sobic.003G429200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 73240128-73242127 Sorghum bicolor
Sobic.003G429200 5.0kb upstream 5.0kb upstream 6011 true Chr03: 73234117-73240127 Sorghum bicolor
Sobic.003G429200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 73234117-73239116 Sorghum bicolor
Sobic.003G429200 5.0kb downstream 5.0kb downstream 6011 true Chr03: 73239117-73245127 Sorghum bicolor
Sobic.003G429200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 73240128-73245127 Sorghum bicolor
Sobic.003G429200 10.0kb upstream 10.0kb upstream 11011 true Chr03: 73229117-73240127 Sorghum bicolor
Sobic.003G429200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 73229117-73239116 Sorghum bicolor
Sobic.003G429200 10.0kb downstream 10.0kb downstream 11011 true Chr03: 73239117-73250127 Sorghum bicolor
Sobic.003G429200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 73240128-73250127 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192007 5267 Panicoideae View MSA
124569457 5269 Grass View MSA
122042221 5273 Angiosperm View MSA
121309937 5274 Embryophyte View MSA
123347565 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.021        
cufflinks 15.38     High  
cufflinks 8.726        
cufflinks 7.145        
cufflinks 3.395       Low
cufflinks 21.252     High High
cufflinks 10.374        
cufflinks 6.098        
cufflinks 8.301        
cufflinks 16.054     High High
cufflinks 19.314     High High
cufflinks 11.403        
cufflinks 5.046        
cufflinks 11.713     High  
cufflinks 5.808        
cufflinks 9.561        
cufflinks 6.573        
cufflinks 7.582        
cufflinks 5.721        
cufflinks 5.038        
cufflinks 2.221       Low
cufflinks 24.665     High High
cufflinks 10.634        
cufflinks 10.842        
cufflinks 10.063     High  
cufflinks 8.951     High  
cufflinks 6.649        
cufflinks 1.684       Low
cufflinks 6.276        
cufflinks 7.969        

0 Strain