Gene : Sobic.003G433900 S. bicolor v3.1.1
Defline:  (1 of 1) PF11910 - Cyanobacterial and plant NDH-1 subunit O (NdhO) Genomic Order:  4555
Name:  ? Sobic.003G433900 Secondary Identifier:  ? PAC:37918654
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G433900 0.5kb upstream 0.5kb upstream 2473 true Chr03: 73561594-73564066 Sorghum bicolor
Sobic.003G433900 0.5kb upstream 0.5kb upstream 500 false Chr03: 73561594-73562093 Sorghum bicolor
Sobic.003G433900 0.5kb downstream 0.5kb downstream 2473 true Chr03: 73562094-73564566 Sorghum bicolor
Sobic.003G433900 0.5kb downstream 0.5kb downstream 500 false Chr03: 73564067-73564566 Sorghum bicolor
Sobic.003G433900 1.0kb upstream 1.0kb upstream 2973 true Chr03: 73561094-73564066 Sorghum bicolor
Sobic.003G433900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 73561094-73562093 Sorghum bicolor
Sobic.003G433900 1.0kb downstream 1.0kb downstream 2973 true Chr03: 73562094-73565066 Sorghum bicolor
Sobic.003G433900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 73564067-73565066 Sorghum bicolor
Sobic.003G433900 2.0kb upstream 2.0kb upstream 3973 true Chr03: 73560094-73564066 Sorghum bicolor
Sobic.003G433900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 73560094-73562093 Sorghum bicolor
Sobic.003G433900 2.0kb downstream 2.0kb downstream 3973 true Chr03: 73562094-73566066 Sorghum bicolor
Sobic.003G433900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 73564067-73566066 Sorghum bicolor
Sobic.003G433900 5.0kb upstream 5.0kb upstream 6973 true Chr03: 73557094-73564066 Sorghum bicolor
Sobic.003G433900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 73557094-73562093 Sorghum bicolor
Sobic.003G433900 5.0kb downstream 5.0kb downstream 6973 true Chr03: 73562094-73569066 Sorghum bicolor
Sobic.003G433900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 73564067-73569066 Sorghum bicolor
Sobic.003G433900 10.0kb upstream 10.0kb upstream 11973 true Chr03: 73552094-73564066 Sorghum bicolor
Sobic.003G433900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 73552094-73562093 Sorghum bicolor
Sobic.003G433900 10.0kb downstream 10.0kb downstream 11973 true Chr03: 73562094-73574066 Sorghum bicolor
Sobic.003G433900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 73564067-73574066 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189886 5267 Panicoideae View MSA
124568380 5269 Grass View MSA
122043742 5273 Angiosperm View MSA
121347549 5274 Embryophyte View MSA
123380569 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.344        
cufflinks 113.009     High High
cufflinks 25.523     High  
cufflinks 12.706     High  
cufflinks 1.774        
cufflinks 49.115     High High
cufflinks 31.967     High  
cufflinks 82.779     High High
cufflinks 4.791        
cufflinks 4.093        
cufflinks 0.115       Low
cufflinks 0.049     Low Low
cufflinks 3.625        
cufflinks 0.027     Low Low
cufflinks 20.188     High  
cufflinks 53.573     High High
cufflinks 29.609     High  
cufflinks 39.81     High  
cufflinks 86.268     High High
cufflinks 10.647        
cufflinks 2.998        
cufflinks 0.024     Low Low
cufflinks 0.037     Low Low
cufflinks 0.155       Low
cufflinks 35.18     High  
cufflinks 122.694     High High
cufflinks 0.044     Low Low
cufflinks 1.5        
cufflinks 37.402     High  
cufflinks 12.368     High  

0 Strain