Gene : Sobic.001G180200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11266:SF16 - PEROXISOMAL MEMBRANE (MPV17/PMP22) FAMILY PROTEIN Genomic Order:  1869
Name:  ? Sobic.001G180200 Secondary Identifier:  ? PAC:37940623
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G180200 0.5kb upstream 0.5kb upstream 6138 true Chr01: 15278638-15284775 Sorghum bicolor
Sobic.001G180200 0.5kb upstream 0.5kb upstream 500 false Chr01: 15284276-15284775 Sorghum bicolor
Sobic.001G180200 0.5kb downstream 0.5kb downstream 6138 true Chr01: 15278138-15284275 Sorghum bicolor
Sobic.001G180200 0.5kb downstream 0.5kb downstream 500 false Chr01: 15278138-15278637 Sorghum bicolor
Sobic.001G180200 1.0kb upstream 1.0kb upstream 6638 true Chr01: 15278638-15285275 Sorghum bicolor
Sobic.001G180200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 15284276-15285275 Sorghum bicolor
Sobic.001G180200 1.0kb downstream 1.0kb downstream 6638 true Chr01: 15277638-15284275 Sorghum bicolor
Sobic.001G180200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 15277638-15278637 Sorghum bicolor
Sobic.001G180200 2.0kb upstream 2.0kb upstream 7638 true Chr01: 15278638-15286275 Sorghum bicolor
Sobic.001G180200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 15284276-15286275 Sorghum bicolor
Sobic.001G180200 2.0kb downstream 2.0kb downstream 7638 true Chr01: 15276638-15284275 Sorghum bicolor
Sobic.001G180200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 15276638-15278637 Sorghum bicolor
Sobic.001G180200 5.0kb upstream 5.0kb upstream 10638 true Chr01: 15278638-15289275 Sorghum bicolor
Sobic.001G180200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 15284276-15289275 Sorghum bicolor
Sobic.001G180200 5.0kb downstream 5.0kb downstream 10638 true Chr01: 15273638-15284275 Sorghum bicolor
Sobic.001G180200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 15273638-15278637 Sorghum bicolor
Sobic.001G180200 10.0kb upstream 10.0kb upstream 15638 true Chr01: 15278638-15294275 Sorghum bicolor
Sobic.001G180200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 15284276-15294275 Sorghum bicolor
Sobic.001G180200 10.0kb downstream 10.0kb downstream 15638 true Chr01: 15268638-15284275 Sorghum bicolor
Sobic.001G180200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 15268638-15278637 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188333 5267 Panicoideae View MSA
124572572 5269 Grass View MSA
122044681 5273 Angiosperm View MSA
121345710 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.191        
cufflinks 527.796     High High
cufflinks 240.899     High High
cufflinks 137.984     High High
cufflinks 3.363        
cufflinks 211.207     High High
cufflinks 121.759     High High
cufflinks 81.793     High  
cufflinks 10.923        
cufflinks 11.287        
cufflinks 2.714       Low
cufflinks 4.435        
cufflinks 11.422     High  
cufflinks 2.843        
cufflinks 42.964     High  
cufflinks 459.99     High High
cufflinks 114.238     High  
cufflinks 122.201     High High
cufflinks 134.045     High High
cufflinks 95.021     High  
cufflinks 3.926        
cufflinks 3.228        
cufflinks 3.771        
cufflinks 3.507        
cufflinks 416.941     High High
cufflinks 369.483     High High
cufflinks 4.268        
cufflinks 1.619       Low
cufflinks 22.979     High  
cufflinks 34.476     High  

0 Strain