Gene : Sobic.003G435500 S. bicolor v3.1.1
Defline:  (1 of 1) KOG0979 - Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily Genomic Order:  4570
Name:  ? Sobic.003G435500 Secondary Identifier:  ? PAC:37914811
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G435500 0.5kb upstream 0.5kb upstream 12318 true Chr03: 73681622-73693939 Sorghum bicolor
Sobic.003G435500 0.5kb upstream 0.5kb upstream 500 false Chr03: 73681622-73682121 Sorghum bicolor
Sobic.003G435500 0.5kb downstream 0.5kb downstream 12318 true Chr03: 73682122-73694439 Sorghum bicolor
Sobic.003G435500 0.5kb downstream 0.5kb downstream 500 false Chr03: 73693940-73694439 Sorghum bicolor
Sobic.003G435500 1.0kb upstream 1.0kb upstream 12818 true Chr03: 73681122-73693939 Sorghum bicolor
Sobic.003G435500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 73681122-73682121 Sorghum bicolor
Sobic.003G435500 1.0kb downstream 1.0kb downstream 12818 true Chr03: 73682122-73694939 Sorghum bicolor
Sobic.003G435500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 73693940-73694939 Sorghum bicolor
Sobic.003G435500 2.0kb upstream 2.0kb upstream 13818 true Chr03: 73680122-73693939 Sorghum bicolor
Sobic.003G435500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 73680122-73682121 Sorghum bicolor
Sobic.003G435500 2.0kb downstream 2.0kb downstream 13818 true Chr03: 73682122-73695939 Sorghum bicolor
Sobic.003G435500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 73693940-73695939 Sorghum bicolor
Sobic.003G435500 5.0kb upstream 5.0kb upstream 16818 true Chr03: 73677122-73693939 Sorghum bicolor
Sobic.003G435500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 73677122-73682121 Sorghum bicolor
Sobic.003G435500 5.0kb downstream 5.0kb downstream 16818 true Chr03: 73682122-73698939 Sorghum bicolor
Sobic.003G435500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 73693940-73698939 Sorghum bicolor
Sobic.003G435500 10.0kb upstream 10.0kb upstream 21818 true Chr03: 73672122-73693939 Sorghum bicolor
Sobic.003G435500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 73672122-73682121 Sorghum bicolor
Sobic.003G435500 10.0kb downstream 10.0kb downstream 21818 true Chr03: 73682122-73703939 Sorghum bicolor
Sobic.003G435500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 73693940-73703939 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182088 5267 Panicoideae View MSA
124582435 5269 Grass View MSA
122048313 5273 Angiosperm View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.147       Low
cufflinks 0.991       Low
cufflinks 2.343       Low
cufflinks 2.104       Low
cufflinks 11.897       High
cufflinks 3.471        
cufflinks 7.081        
cufflinks 2.962        
cufflinks 6.254        
cufflinks 4.191        
cufflinks 8.41        
cufflinks 8.645        
cufflinks 7.073        
cufflinks 7.606        
cufflinks 7.297        
cufflinks 1.814       Low
cufflinks 6.38        
cufflinks 7.014        
cufflinks 4.049        
cufflinks 6.907        
cufflinks 19.933     High High
cufflinks 7.888        
cufflinks 8.369        
cufflinks 8.062        
cufflinks 1.971       Low
cufflinks 1.083       Low
cufflinks 6.339        
cufflinks 0.94       Low
cufflinks 7.862        
cufflinks 9.144        

0 Strain