Protein Family : E3 ubiquitin ligase involved in syntaxin degradation 122182088

Method ID:  5267 Method Name:  Panicoideae
Sequence Alignment:  View MSA Member Count:  10

10 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Seita.9G271300 (1 of 1) KOG0979 - Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily S. italica v2.2 9319   scaffold_9: 23397172-23406490
Zm00008a012673 (1 of 1) KOG0979 - Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily Z. mays PH207 v1.1 13050   chr03: 146610980-146624029
Pavir.9NG401100 (1 of 1) KOG0978//KOG2991 - E3 ubiquitin ligase involved in syntaxin degradation // Splicing regulator P. virgatum v4.1 10765   Chr09N: 62663187-62673951
Sobic.003G435500 (1 of 1) KOG0979 - Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily S. bicolor v3.1.1 11818   Chr03: 73682122-73693939
Zm00001d042028 (1 of 1) KOG0978//KOG0979 - E3 ubiquitin ligase involved in syntaxin degradation // Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily Z. mays RefGen_V4 12676   3: 147774770-147787445
Pahal.9G259200 (1 of 1) KOG0978//KOG4568 - E3 ubiquitin ligase involved in syntaxin degradation // Cytoskeleton-associated protein and related proteins P. hallii v3.1 8505   Chr09: 19161827-19170331
PhHAL.9G259800 (1 of 1) KOG0978//KOG4568 - E3 ubiquitin ligase involved in syntaxin degradation // Cytoskeleton-associated protein and related proteins P. hallii HAL v2.1 8534   Chr09: 19067114-19075647
Misin05G379000 (1 of 1) KOG0978//KOG0979 - E3 ubiquitin ligase involved in syntaxin degradation // Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily M. sinensis v7.1 12044   Chr05: 109272259-109284302
Misin06G392300 (1 of 16) PF10358 - N-terminal C2 in EEIG1 and EHBP1 proteins (NT-C2) M. sinensis v7.1 11925   Chr06: 114984936-114996860
Sevir.9G272100 (1 of 1) KOG0979 - Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily S. viridis v2.1 12347   Chr_09: 23263422-23275768

10 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Seita.9G271300.1.p S. italica v2.2 122182088 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Zm00008a012673_P01 Z. mays PH207 v1.1 122182088 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Pavir.9NG401100.1.p P. virgatum v4.1 122182088 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Zm00001d042028_P006 Z. mays RefGen_V4 122182088 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
PhHAL.9G259800.1.p P. hallii HAL v2.1 122182088 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Misin05G379000.1.p M. sinensis v7.1 122182088 E3 ubiquitin ligase involved in syntaxin degradation 2 5267 Panicoideae
Misin06G392300.1.p M. sinensis v7.1 122182088 E3 ubiquitin ligase involved in syntaxin degradation 2 5267 Panicoideae
Sevir.9G272100.1.p S. viridis v2.1 122182088 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Sobic.003G435500.2.p S. bicolor v3.1.1 122182088 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Pahal.9G259200.1.p P. hallii v3.1 122182088 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae