Gene : Sobic.003G444500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR30544:SF6 - RADICAL SAM DOMAIN-CONTAINING PROTEIN Genomic Order:  4659
Name:  ? Sobic.003G444500 Secondary Identifier:  ? PAC:37915714
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G444500 0.5kb upstream 0.5kb upstream 3193 true Chr03: 74269255-74272447 Sorghum bicolor
Sobic.003G444500 0.5kb upstream 0.5kb upstream 500 false Chr03: 74271948-74272447 Sorghum bicolor
Sobic.003G444500 0.5kb downstream 0.5kb downstream 3193 true Chr03: 74268755-74271947 Sorghum bicolor
Sobic.003G444500 0.5kb downstream 0.5kb downstream 500 false Chr03: 74268755-74269254 Sorghum bicolor
Sobic.003G444500 1.0kb upstream 1.0kb upstream 3693 true Chr03: 74269255-74272947 Sorghum bicolor
Sobic.003G444500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 74271948-74272947 Sorghum bicolor
Sobic.003G444500 1.0kb downstream 1.0kb downstream 3693 true Chr03: 74268255-74271947 Sorghum bicolor
Sobic.003G444500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 74268255-74269254 Sorghum bicolor
Sobic.003G444500 2.0kb upstream 2.0kb upstream 4693 true Chr03: 74269255-74273947 Sorghum bicolor
Sobic.003G444500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 74271948-74273947 Sorghum bicolor
Sobic.003G444500 2.0kb downstream 2.0kb downstream 4693 true Chr03: 74267255-74271947 Sorghum bicolor
Sobic.003G444500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 74267255-74269254 Sorghum bicolor
Sobic.003G444500 5.0kb upstream 5.0kb upstream 7693 true Chr03: 74269255-74276947 Sorghum bicolor
Sobic.003G444500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 74271948-74276947 Sorghum bicolor
Sobic.003G444500 5.0kb downstream 5.0kb downstream 7693 true Chr03: 74264255-74271947 Sorghum bicolor
Sobic.003G444500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 74264255-74269254 Sorghum bicolor
Sobic.003G444500 10.0kb upstream 10.0kb upstream 12693 true Chr03: 74269255-74281947 Sorghum bicolor
Sobic.003G444500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 74271948-74281947 Sorghum bicolor
Sobic.003G444500 10.0kb downstream 10.0kb downstream 12693 true Chr03: 74259255-74271947 Sorghum bicolor
Sobic.003G444500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 74259255-74269254 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175331 5267 Panicoideae View MSA
124576335 5269 Grass View MSA
122048523 5273 Angiosperm View MSA
123429187 5275 Viridiplantae View MSA
121344688 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.331        
cufflinks 5.658        
cufflinks 10.207     High High
cufflinks 6.067        
cufflinks 3.904        
cufflinks 5.109        
cufflinks 14.617     High High
cufflinks 12.159     High High
cufflinks 4.641        
cufflinks 4.835        
cufflinks 2.166       Low
cufflinks 2.706       Low
cufflinks 3.313        
cufflinks 2.407       Low
cufflinks 5.41        
cufflinks 7.724        
cufflinks 15.197     High High
cufflinks 19.335     High High
cufflinks 5.808        
cufflinks 8.692        
cufflinks 7.52        
cufflinks 3.161        
cufflinks 3.157        
cufflinks 3.331        
cufflinks 2.395       Low
cufflinks 4.78        
cufflinks 2.245       Low
cufflinks 2.994        
cufflinks 29.494     High High
cufflinks 7.196        

0 Strain