Gene : Sobic.001G285800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31394//PTHR31394:SF1 - FAMILY NOT NAMED // TRANSMEMBRANE PROTEIN 199 Genomic Order:  3008
Name:  ? Sobic.001G285800 Secondary Identifier:  ? PAC:37944386
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G285800 0.5kb upstream 0.5kb upstream 8989 true Chr01: 55922693-55931681 Sorghum bicolor
Sobic.001G285800 0.5kb upstream 0.5kb upstream 500 false Chr01: 55922693-55923192 Sorghum bicolor
Sobic.001G285800 0.5kb downstream 0.5kb downstream 8989 true Chr01: 55923193-55932181 Sorghum bicolor
Sobic.001G285800 0.5kb downstream 0.5kb downstream 500 false Chr01: 55931682-55932181 Sorghum bicolor
Sobic.001G285800 1.0kb upstream 1.0kb upstream 9489 true Chr01: 55922193-55931681 Sorghum bicolor
Sobic.001G285800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 55922193-55923192 Sorghum bicolor
Sobic.001G285800 1.0kb downstream 1.0kb downstream 9489 true Chr01: 55923193-55932681 Sorghum bicolor
Sobic.001G285800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 55931682-55932681 Sorghum bicolor
Sobic.001G285800 2.0kb upstream 2.0kb upstream 10489 true Chr01: 55921193-55931681 Sorghum bicolor
Sobic.001G285800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 55921193-55923192 Sorghum bicolor
Sobic.001G285800 2.0kb downstream 2.0kb downstream 10489 true Chr01: 55923193-55933681 Sorghum bicolor
Sobic.001G285800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 55931682-55933681 Sorghum bicolor
Sobic.001G285800 5.0kb upstream 5.0kb upstream 13489 true Chr01: 55918193-55931681 Sorghum bicolor
Sobic.001G285800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 55918193-55923192 Sorghum bicolor
Sobic.001G285800 5.0kb downstream 5.0kb downstream 13489 true Chr01: 55923193-55936681 Sorghum bicolor
Sobic.001G285800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55931682-55936681 Sorghum bicolor
Sobic.001G285800 10.0kb upstream 10.0kb upstream 18489 true Chr01: 55913193-55931681 Sorghum bicolor
Sobic.001G285800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 55913193-55923192 Sorghum bicolor
Sobic.001G285800 10.0kb downstream 10.0kb downstream 18489 true Chr01: 55923193-55941681 Sorghum bicolor
Sobic.001G285800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55931682-55941681 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182793 5267 Panicoideae View MSA
124577249 5269 Grass View MSA
122047904 5273 Angiosperm View MSA
121346393 5274 Embryophyte View MSA
123426086 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.83        
cufflinks 0.387       Low
cufflinks 1.094        
cufflinks 2.288       High
cufflinks 1.835        
cufflinks 2.864       High
cufflinks 1.031        
cufflinks 0.42       Low
cufflinks 2.485       High
cufflinks 2.519       High
cufflinks 0.807        
cufflinks 1.109        
cufflinks 1.726        
cufflinks 0.872        
cufflinks 1.354        
cufflinks 0.634       Low
cufflinks 1.065        
cufflinks 1.116        
cufflinks 0.828        
cufflinks 1.508        
cufflinks 1.441        
cufflinks 1.017        
cufflinks 1.043        
cufflinks 0.847        
cufflinks 0.755        
cufflinks 0.357       Low
cufflinks 1.012        
cufflinks 2.548       High
cufflinks 0.687       Low
cufflinks 1.38        

0 Strain