Gene : Sobic.005G074400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR18929//PTHR18929:SF106 - PROTEIN DISULFIDE ISOMERASE // SUBFAMILY NOT NAMED Genomic Order:  746
Name:  ? Sobic.005G074400 Secondary Identifier:  ? PAC:37924286
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G074400 0.5kb upstream 0.5kb upstream 4449 true Chr05: 9023193-9027641 Sorghum bicolor
Sobic.005G074400 0.5kb upstream 0.5kb upstream 500 false Chr05: 9027142-9027641 Sorghum bicolor
Sobic.005G074400 0.5kb downstream 0.5kb downstream 4449 true Chr05: 9022693-9027141 Sorghum bicolor
Sobic.005G074400 0.5kb downstream 0.5kb downstream 500 false Chr05: 9022693-9023192 Sorghum bicolor
Sobic.005G074400 1.0kb upstream 1.0kb upstream 4949 true Chr05: 9023193-9028141 Sorghum bicolor
Sobic.005G074400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 9027142-9028141 Sorghum bicolor
Sobic.005G074400 1.0kb downstream 1.0kb downstream 4949 true Chr05: 9022193-9027141 Sorghum bicolor
Sobic.005G074400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 9022193-9023192 Sorghum bicolor
Sobic.005G074400 2.0kb upstream 2.0kb upstream 5949 true Chr05: 9023193-9029141 Sorghum bicolor
Sobic.005G074400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 9027142-9029141 Sorghum bicolor
Sobic.005G074400 2.0kb downstream 2.0kb downstream 5949 true Chr05: 9021193-9027141 Sorghum bicolor
Sobic.005G074400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 9021193-9023192 Sorghum bicolor
Sobic.005G074400 5.0kb upstream 5.0kb upstream 8949 true Chr05: 9023193-9032141 Sorghum bicolor
Sobic.005G074400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 9027142-9032141 Sorghum bicolor
Sobic.005G074400 5.0kb downstream 5.0kb downstream 8949 true Chr05: 9018193-9027141 Sorghum bicolor
Sobic.005G074400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 9018193-9023192 Sorghum bicolor
Sobic.005G074400 10.0kb upstream 10.0kb upstream 13949 true Chr05: 9023193-9037141 Sorghum bicolor
Sobic.005G074400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 9027142-9037141 Sorghum bicolor
Sobic.005G074400 10.0kb downstream 10.0kb downstream 13949 true Chr05: 9013193-9027141 Sorghum bicolor
Sobic.005G074400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 9013193-9023192 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181263 5267 Panicoideae View MSA
124580253 5269 Grass View MSA
122043739 5273 Angiosperm View MSA
121345717 5274 Embryophyte View MSA
123426442 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 80.131     High High
cufflinks 1.467       Low
cufflinks 4.377       Low
cufflinks 15.314     High  
cufflinks 36.302     High  
cufflinks 6.443       Low
cufflinks 28.455     High  
cufflinks 3.778       Low
cufflinks 27.297     High  
cufflinks 28.838     High  
cufflinks 44.767     High  
cufflinks 45.39     High  
cufflinks 15.055     High  
cufflinks 63.178     High  
cufflinks 20.504     High  
cufflinks 3.939       Low
cufflinks 31.129     High  
cufflinks 30.159     High  
cufflinks 5.841       Low
cufflinks 25.598     High  
cufflinks 38.237     High  
cufflinks 70.743     High High
cufflinks 63.517     High  
cufflinks 70.533     High High
cufflinks 4.896       Low
cufflinks 1.438       Low
cufflinks 30.949     High  
cufflinks 32.078     High  
cufflinks 21.346     High  
cufflinks 71.296     High High

0 Strain