Gene : Sobic.005G076500 S. bicolor v3.1.1
Defline:  (1 of 8) PTHR23155//PTHR23155:SF541 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  768
Name:  ? Sobic.005G076500 Secondary Identifier:  ? PAC:37924081
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G076500 0.5kb upstream 0.5kb upstream 7436 true Chr05: 9421061-9428496 Sorghum bicolor
Sobic.005G076500 0.5kb upstream 0.5kb upstream 500 false Chr05: 9421061-9421560 Sorghum bicolor
Sobic.005G076500 0.5kb downstream 0.5kb downstream 7436 true Chr05: 9421561-9428996 Sorghum bicolor
Sobic.005G076500 0.5kb downstream 0.5kb downstream 500 false Chr05: 9428497-9428996 Sorghum bicolor
Sobic.005G076500 1.0kb upstream 1.0kb upstream 7936 true Chr05: 9420561-9428496 Sorghum bicolor
Sobic.005G076500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 9420561-9421560 Sorghum bicolor
Sobic.005G076500 1.0kb downstream 1.0kb downstream 7936 true Chr05: 9421561-9429496 Sorghum bicolor
Sobic.005G076500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 9428497-9429496 Sorghum bicolor
Sobic.005G076500 2.0kb upstream 2.0kb upstream 8936 true Chr05: 9419561-9428496 Sorghum bicolor
Sobic.005G076500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 9419561-9421560 Sorghum bicolor
Sobic.005G076500 2.0kb downstream 2.0kb downstream 8936 true Chr05: 9421561-9430496 Sorghum bicolor
Sobic.005G076500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 9428497-9430496 Sorghum bicolor
Sobic.005G076500 5.0kb upstream 5.0kb upstream 11936 true Chr05: 9416561-9428496 Sorghum bicolor
Sobic.005G076500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 9416561-9421560 Sorghum bicolor
Sobic.005G076500 5.0kb downstream 5.0kb downstream 11936 true Chr05: 9421561-9433496 Sorghum bicolor
Sobic.005G076500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 9428497-9433496 Sorghum bicolor
Sobic.005G076500 10.0kb upstream 10.0kb upstream 16936 true Chr05: 9411561-9428496 Sorghum bicolor
Sobic.005G076500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 9411561-9421560 Sorghum bicolor
Sobic.005G076500 10.0kb downstream 10.0kb downstream 16936 true Chr05: 9421561-9438496 Sorghum bicolor
Sobic.005G076500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 9428497-9438496 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199125 5267 Panicoideae View MSA
124590789 5269 Grass View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.343        
cufflinks 0.103       Low
cufflinks 1.158       High
cufflinks 0.874       High
cufflinks 0.47        
cufflinks 0.374        
cufflinks 0.35        
cufflinks 0.137       Low
cufflinks 0.635        
cufflinks 0.524        
cufflinks 0.591        
cufflinks 0.758        
cufflinks 0.288        
cufflinks 0.708        
cufflinks 0.409        
cufflinks 0.675        
cufflinks 0.331        
cufflinks 0.283        
cufflinks 0.359        
cufflinks 0.653        
cufflinks 0.569        
cufflinks 0.386        
cufflinks 0.556        
cufflinks 0.58        
cufflinks 1.121       High
cufflinks 0.146       Low
cufflinks 0.655        
cufflinks 0.156       Low
cufflinks 0.183       Low
cufflinks 0.534        

0 Strain