Gene : Sobic.005G079900 S. bicolor v3.1.1
Defline:  (1 of 33) KOG1947 - Leucine rich repeat proteins, some proteins contain F-box Genomic Order:  809
Name:  ? Sobic.005G079900 Secondary Identifier:  ? PAC:37923683
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G079900 0.5kb upstream 0.5kb upstream 1904 true Chr05: 10489538-10491441 Sorghum bicolor
Sobic.005G079900 0.5kb upstream 0.5kb upstream 500 false Chr05: 10490942-10491441 Sorghum bicolor
Sobic.005G079900 0.5kb downstream 0.5kb downstream 1904 true Chr05: 10489038-10490941 Sorghum bicolor
Sobic.005G079900 0.5kb downstream 0.5kb downstream 500 false Chr05: 10489038-10489537 Sorghum bicolor
Sobic.005G079900 1.0kb upstream 1.0kb upstream 2404 true Chr05: 10489538-10491941 Sorghum bicolor
Sobic.005G079900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 10490942-10491941 Sorghum bicolor
Sobic.005G079900 1.0kb downstream 1.0kb downstream 2404 true Chr05: 10488538-10490941 Sorghum bicolor
Sobic.005G079900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 10488538-10489537 Sorghum bicolor
Sobic.005G079900 2.0kb upstream 2.0kb upstream 3404 true Chr05: 10489538-10492941 Sorghum bicolor
Sobic.005G079900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 10490942-10492941 Sorghum bicolor
Sobic.005G079900 2.0kb downstream 2.0kb downstream 3404 true Chr05: 10487538-10490941 Sorghum bicolor
Sobic.005G079900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 10487538-10489537 Sorghum bicolor
Sobic.005G079900 5.0kb upstream 5.0kb upstream 6404 true Chr05: 10489538-10495941 Sorghum bicolor
Sobic.005G079900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 10490942-10495941 Sorghum bicolor
Sobic.005G079900 5.0kb downstream 5.0kb downstream 6404 true Chr05: 10484538-10490941 Sorghum bicolor
Sobic.005G079900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 10484538-10489537 Sorghum bicolor
Sobic.005G079900 10.0kb upstream 10.0kb upstream 11404 true Chr05: 10489538-10500941 Sorghum bicolor
Sobic.005G079900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 10490942-10500941 Sorghum bicolor
Sobic.005G079900 10.0kb downstream 10.0kb downstream 11404 true Chr05: 10479538-10490941 Sorghum bicolor
Sobic.005G079900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 10479538-10489537 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188782 5267 Panicoideae View MSA
124584226 5269 Grass View MSA
122050086 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121349716 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.889     High High
cufflinks 3.634       Low
cufflinks 7.382        
cufflinks 7.57        
cufflinks 4.605       Low
cufflinks 6.885        
cufflinks 5.732        
cufflinks 4.021       Low
cufflinks 8.429        
cufflinks 9.316        
cufflinks 14.221     High High
cufflinks 18.42     High High
cufflinks 7.738        
cufflinks 15.381     High High
cufflinks 7.649        
cufflinks 6.708        
cufflinks 6.331        
cufflinks 6.156        
cufflinks 3.227       Low
cufflinks 9.854        
cufflinks 5.763        
cufflinks 11.413        
cufflinks 14.166     High High
cufflinks 13.728     High High
cufflinks 4.561       Low
cufflinks 2.448       Low
cufflinks 15.874     High High
cufflinks 5.259        
cufflinks 6.073        
cufflinks 8.178        

0 Strain