Gene : Sobic.001G268300 S. bicolor v3.1.1
Defline:  (1 of 1) K15407 - queuine tRNA-ribosyltransferase subunit QTRTD1 [EC:2.4.2.29] (QTRTD1) Genomic Order:  2834
Name:  ? Sobic.001G268300 Secondary Identifier:  ? PAC:37938170
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G268300 0.5kb upstream 0.5kb upstream 7274 true Chr01: 51310130-51317403 Sorghum bicolor
Sobic.001G268300 0.5kb upstream 0.5kb upstream 500 false Chr01: 51316904-51317403 Sorghum bicolor
Sobic.001G268300 0.5kb downstream 0.5kb downstream 7274 true Chr01: 51309630-51316903 Sorghum bicolor
Sobic.001G268300 0.5kb downstream 0.5kb downstream 500 false Chr01: 51309630-51310129 Sorghum bicolor
Sobic.001G268300 1.0kb upstream 1.0kb upstream 7774 true Chr01: 51310130-51317903 Sorghum bicolor
Sobic.001G268300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 51316904-51317903 Sorghum bicolor
Sobic.001G268300 1.0kb downstream 1.0kb downstream 7774 true Chr01: 51309130-51316903 Sorghum bicolor
Sobic.001G268300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 51309130-51310129 Sorghum bicolor
Sobic.001G268300 2.0kb upstream 2.0kb upstream 8774 true Chr01: 51310130-51318903 Sorghum bicolor
Sobic.001G268300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51316904-51318903 Sorghum bicolor
Sobic.001G268300 2.0kb downstream 2.0kb downstream 8774 true Chr01: 51308130-51316903 Sorghum bicolor
Sobic.001G268300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 51308130-51310129 Sorghum bicolor
Sobic.001G268300 5.0kb upstream 5.0kb upstream 11774 true Chr01: 51310130-51321903 Sorghum bicolor
Sobic.001G268300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 51316904-51321903 Sorghum bicolor
Sobic.001G268300 5.0kb downstream 5.0kb downstream 11774 true Chr01: 51305130-51316903 Sorghum bicolor
Sobic.001G268300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 51305130-51310129 Sorghum bicolor
Sobic.001G268300 10.0kb upstream 10.0kb upstream 16774 true Chr01: 51310130-51326903 Sorghum bicolor
Sobic.001G268300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 51316904-51326903 Sorghum bicolor
Sobic.001G268300 10.0kb downstream 10.0kb downstream 16774 true Chr01: 51300130-51316903 Sorghum bicolor
Sobic.001G268300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 51300130-51310129 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187425 5267 Panicoideae View MSA
124572694 5269 Grass View MSA
122048440 5273 Angiosperm View MSA
121348371 5274 Embryophyte View MSA
123426152 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.098       High
cufflinks 0.039     Low Low
cufflinks 0.118       Low
cufflinks 0.136        
cufflinks 0.754       High
cufflinks 0.328        
cufflinks 0.29        
cufflinks 0.074       Low
cufflinks 0.398        
cufflinks 0.454        
cufflinks 0.366        
cufflinks 0.366        
cufflinks 0.315        
cufflinks 0.349        
cufflinks 0.409        
cufflinks 0.06     Low Low
cufflinks 0.329        
cufflinks 0.357        
cufflinks 0.065     Low Low
cufflinks 0.303        
cufflinks 1.143       High
cufflinks 0.504        
cufflinks 0.443        
cufflinks 0.527        
cufflinks 0.053       Low
cufflinks 0.025     Low Low
cufflinks 0.369        
cufflinks 0.26        
cufflinks 0.353        
cufflinks 0.599        

0 Strain