Gene : Sobic.001G349500 S. bicolor v3.1.1
Defline:  (1 of 2) K07952 - ADP-ribosylation factor related protein 1 (ARFRP1) Genomic Order:  3667
Name:  ? Sobic.001G349500 Secondary Identifier:  ? PAC:37940992
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G349500 0.5kb upstream 0.5kb upstream 4351 true Chr01: 63901440-63905790 Sorghum bicolor
Sobic.001G349500 0.5kb upstream 0.5kb upstream 500 false Chr01: 63905291-63905790 Sorghum bicolor
Sobic.001G349500 0.5kb downstream 0.5kb downstream 4351 true Chr01: 63900940-63905290 Sorghum bicolor
Sobic.001G349500 0.5kb downstream 0.5kb downstream 500 false Chr01: 63900940-63901439 Sorghum bicolor
Sobic.001G349500 1.0kb upstream 1.0kb upstream 4851 true Chr01: 63901440-63906290 Sorghum bicolor
Sobic.001G349500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 63905291-63906290 Sorghum bicolor
Sobic.001G349500 1.0kb downstream 1.0kb downstream 4851 true Chr01: 63900440-63905290 Sorghum bicolor
Sobic.001G349500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 63900440-63901439 Sorghum bicolor
Sobic.001G349500 2.0kb upstream 2.0kb upstream 5851 true Chr01: 63901440-63907290 Sorghum bicolor
Sobic.001G349500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 63905291-63907290 Sorghum bicolor
Sobic.001G349500 2.0kb downstream 2.0kb downstream 5851 true Chr01: 63899440-63905290 Sorghum bicolor
Sobic.001G349500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 63899440-63901439 Sorghum bicolor
Sobic.001G349500 5.0kb upstream 5.0kb upstream 8851 true Chr01: 63901440-63910290 Sorghum bicolor
Sobic.001G349500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 63905291-63910290 Sorghum bicolor
Sobic.001G349500 5.0kb downstream 5.0kb downstream 8851 true Chr01: 63896440-63905290 Sorghum bicolor
Sobic.001G349500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 63896440-63901439 Sorghum bicolor
Sobic.001G349500 10.0kb upstream 10.0kb upstream 13851 true Chr01: 63901440-63915290 Sorghum bicolor
Sobic.001G349500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 63905291-63915290 Sorghum bicolor
Sobic.001G349500 10.0kb downstream 10.0kb downstream 13851 true Chr01: 63891440-63905290 Sorghum bicolor
Sobic.001G349500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 63891440-63901439 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189522 5267 Panicoideae View MSA
124584007 5269 Grass View MSA
122045512 5273 Angiosperm View MSA
121347621 5274 Embryophyte View MSA
123424811 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.67        
cufflinks 0.532       Low
cufflinks 2.774        
cufflinks 5.25        
cufflinks 3.53        
cufflinks 6.337        
cufflinks 2.456        
cufflinks 2.296        
cufflinks 6.589        
cufflinks 5.244        
cufflinks 5.68        
cufflinks 5.533        
cufflinks 5.478        
cufflinks 5.994        
cufflinks 3.682        
cufflinks 2.844        
cufflinks 2.518        
cufflinks 2.879        
cufflinks 6.25        
cufflinks 4.568        
cufflinks 2.79        
cufflinks 5.862        
cufflinks 5.115        
cufflinks 5.017        
cufflinks 1.401       Low
cufflinks 0.811       Low
cufflinks 6.219        
cufflinks 0.834       Low
cufflinks 4.1        
cufflinks 3.529        

0 Strain