Gene : Sobic.005G034000 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11772:SF18 - ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS Genomic Order:  335
Name:  ? Sobic.005G034000 Secondary Identifier:  ? PAC:37923839
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G034000 0.5kb upstream 0.5kb upstream 5330 true Chr05: 3065482-3070811 Sorghum bicolor
Sobic.005G034000 0.5kb upstream 0.5kb upstream 500 false Chr05: 3070312-3070811 Sorghum bicolor
Sobic.005G034000 0.5kb downstream 0.5kb downstream 5330 true Chr05: 3064982-3070311 Sorghum bicolor
Sobic.005G034000 0.5kb downstream 0.5kb downstream 500 false Chr05: 3064982-3065481 Sorghum bicolor
Sobic.005G034000 1.0kb upstream 1.0kb upstream 5830 true Chr05: 3065482-3071311 Sorghum bicolor
Sobic.005G034000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3070312-3071311 Sorghum bicolor
Sobic.005G034000 1.0kb downstream 1.0kb downstream 5830 true Chr05: 3064482-3070311 Sorghum bicolor
Sobic.005G034000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3064482-3065481 Sorghum bicolor
Sobic.005G034000 2.0kb upstream 2.0kb upstream 6830 true Chr05: 3065482-3072311 Sorghum bicolor
Sobic.005G034000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3070312-3072311 Sorghum bicolor
Sobic.005G034000 2.0kb downstream 2.0kb downstream 6830 true Chr05: 3063482-3070311 Sorghum bicolor
Sobic.005G034000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3063482-3065481 Sorghum bicolor
Sobic.005G034000 5.0kb upstream 5.0kb upstream 9830 true Chr05: 3065482-3075311 Sorghum bicolor
Sobic.005G034000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3070312-3075311 Sorghum bicolor
Sobic.005G034000 5.0kb downstream 5.0kb downstream 9830 true Chr05: 3060482-3070311 Sorghum bicolor
Sobic.005G034000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3060482-3065481 Sorghum bicolor
Sobic.005G034000 10.0kb upstream 10.0kb upstream 14830 true Chr05: 3065482-3080311 Sorghum bicolor
Sobic.005G034000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3070312-3080311 Sorghum bicolor
Sobic.005G034000 10.0kb downstream 10.0kb downstream 14830 true Chr05: 3055482-3070311 Sorghum bicolor
Sobic.005G034000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3055482-3065481 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192196 5267 Panicoideae View MSA
124580846 5269 Grass View MSA
122049991 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 109.624     High High
cufflinks 8.876     High  
cufflinks 7.269       Low
cufflinks 14.261     High  
cufflinks 4.845       Low
cufflinks 21.653     High  
cufflinks 11.296        
cufflinks 11.767     High  
cufflinks 13.935     High  
cufflinks 13.976     High  
cufflinks 7.993        
cufflinks 22.891     High  
cufflinks 25.867     High  
cufflinks 19.606     High  
cufflinks 9.079        
cufflinks 16.071     High  
cufflinks 12.687     High  
cufflinks 10.256        
cufflinks 9.448        
cufflinks 13.665     High  
cufflinks 27.835     High  
cufflinks 13.015     High  
cufflinks 13.724     High  
cufflinks 11.657     High  
cufflinks 10.347     High  
cufflinks 8.247     High  
cufflinks 33.797     High High
cufflinks 52.809     High High
cufflinks 15.551     High  
cufflinks 8.735        

0 Strain