Gene : Sobic.001G333100 S. bicolor v3.1.1
Defline:  (1 of 1) K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) Genomic Order:  3502
Name:  ? Sobic.001G333100 Secondary Identifier:  ? PAC:37937579
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-7511 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G333100 0.5kb upstream 0.5kb upstream 9619 true Chr01: 62162915-62172533 Sorghum bicolor
Sobic.001G333100 0.5kb upstream 0.5kb upstream 500 false Chr01: 62172034-62172533 Sorghum bicolor
Sobic.001G333100 0.5kb downstream 0.5kb downstream 9619 true Chr01: 62162415-62172033 Sorghum bicolor
Sobic.001G333100 0.5kb downstream 0.5kb downstream 500 false Chr01: 62162415-62162914 Sorghum bicolor
Sobic.001G333100 1.0kb upstream 1.0kb upstream 10119 true Chr01: 62162915-62173033 Sorghum bicolor
Sobic.001G333100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 62172034-62173033 Sorghum bicolor
Sobic.001G333100 1.0kb downstream 1.0kb downstream 10119 true Chr01: 62161915-62172033 Sorghum bicolor
Sobic.001G333100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 62161915-62162914 Sorghum bicolor
Sobic.001G333100 2.0kb upstream 2.0kb upstream 11119 true Chr01: 62162915-62174033 Sorghum bicolor
Sobic.001G333100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 62172034-62174033 Sorghum bicolor
Sobic.001G333100 2.0kb downstream 2.0kb downstream 11119 true Chr01: 62160915-62172033 Sorghum bicolor
Sobic.001G333100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 62160915-62162914 Sorghum bicolor
Sobic.001G333100 5.0kb upstream 5.0kb upstream 14119 true Chr01: 62162915-62177033 Sorghum bicolor
Sobic.001G333100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 62172034-62177033 Sorghum bicolor
Sobic.001G333100 5.0kb downstream 5.0kb downstream 14119 true Chr01: 62157915-62172033 Sorghum bicolor
Sobic.001G333100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 62157915-62162914 Sorghum bicolor
Sobic.001G333100 10.0kb upstream 10.0kb upstream 19119 true Chr01: 62162915-62182033 Sorghum bicolor
Sobic.001G333100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 62172034-62182033 Sorghum bicolor
Sobic.001G333100 10.0kb downstream 10.0kb downstream 19119 true Chr01: 62152915-62172033 Sorghum bicolor
Sobic.001G333100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 62152915-62162914 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176365 5267 Panicoideae View MSA
124586900 5269 Grass View MSA
122042023 5273 Angiosperm View MSA
121344944 5274 Embryophyte View MSA
123426697 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.813        
cufflinks 3.753       Low
cufflinks 4.891       Low
cufflinks 6.529        
cufflinks 9.355        
cufflinks 5.57        
cufflinks 6.12        
cufflinks 4.343       Low
cufflinks 10.413        
cufflinks 11.383        
cufflinks 11.394        
cufflinks 14.067     High High
cufflinks 9.342        
cufflinks 12.861     High High
cufflinks 7.73        
cufflinks 5.426        
cufflinks 6.461        
cufflinks 6.484        
cufflinks 4.721       Low
cufflinks 7.537        
cufflinks 10.574        
cufflinks 12.362     High  
cufflinks 14.379     High High
cufflinks 14.052     High High
cufflinks 6.75        
cufflinks 3.428       Low
cufflinks 11.475     High  
cufflinks 4.47       Low
cufflinks 7.224        
cufflinks 9.205        

0 Strain