Gene : Sobic.001G299700 S. bicolor v3.1.1
Defline:  (1 of 2) K12604 - CCR4-NOT transcription complex subunit 1 (CNOT1, NOT1) Genomic Order:  3150
Name:  ? Sobic.001G299700 Secondary Identifier:  ? PAC:37944667
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G299700 0.5kb upstream 0.5kb upstream 23484 true Chr01: 58073638-58097121 Sorghum bicolor
Sobic.001G299700 0.5kb upstream 0.5kb upstream 500 false Chr01: 58096622-58097121 Sorghum bicolor
Sobic.001G299700 0.5kb downstream 0.5kb downstream 23484 true Chr01: 58073138-58096621 Sorghum bicolor
Sobic.001G299700 0.5kb downstream 0.5kb downstream 500 false Chr01: 58073138-58073637 Sorghum bicolor
Sobic.001G299700 1.0kb upstream 1.0kb upstream 23984 true Chr01: 58073638-58097621 Sorghum bicolor
Sobic.001G299700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 58096622-58097621 Sorghum bicolor
Sobic.001G299700 1.0kb downstream 1.0kb downstream 23984 true Chr01: 58072638-58096621 Sorghum bicolor
Sobic.001G299700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 58072638-58073637 Sorghum bicolor
Sobic.001G299700 2.0kb upstream 2.0kb upstream 24984 true Chr01: 58073638-58098621 Sorghum bicolor
Sobic.001G299700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 58096622-58098621 Sorghum bicolor
Sobic.001G299700 2.0kb downstream 2.0kb downstream 24984 true Chr01: 58071638-58096621 Sorghum bicolor
Sobic.001G299700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 58071638-58073637 Sorghum bicolor
Sobic.001G299700 5.0kb upstream 5.0kb upstream 27984 true Chr01: 58073638-58101621 Sorghum bicolor
Sobic.001G299700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 58096622-58101621 Sorghum bicolor
Sobic.001G299700 5.0kb downstream 5.0kb downstream 27984 true Chr01: 58068638-58096621 Sorghum bicolor
Sobic.001G299700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 58068638-58073637 Sorghum bicolor
Sobic.001G299700 10.0kb upstream 10.0kb upstream 32984 true Chr01: 58073638-58106621 Sorghum bicolor
Sobic.001G299700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 58096622-58106621 Sorghum bicolor
Sobic.001G299700 10.0kb downstream 10.0kb downstream 32984 true Chr01: 58063638-58096621 Sorghum bicolor
Sobic.001G299700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 58063638-58073637 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197302 5267 Panicoideae View MSA
124585691 5269 Grass View MSA
122047484 5273 Angiosperm View MSA
121349285 5274 Embryophyte View MSA
123428109 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.922       Low
cufflinks 2.356        
cufflinks 4.365        
cufflinks 2.97        
cufflinks 5.959       High
cufflinks 3.243        
cufflinks 3.14        
cufflinks 1.987       Low
cufflinks 4.106        
cufflinks 3.798        
cufflinks 4.624        
cufflinks 4.877        
cufflinks 3.742        
cufflinks 3.691        
cufflinks 5.717       High
cufflinks 3.247        
cufflinks 2.589        
cufflinks 2.728        
cufflinks 5.245        
cufflinks 3.083        
cufflinks 10.51       High
cufflinks 3.715        
cufflinks 3.653        
cufflinks 3.683        
cufflinks 4.492        
cufflinks 2.904        
cufflinks 5.55       High
cufflinks 1.282       Low
cufflinks 2.12       Low
cufflinks 6.724       High

0 Strain