Gene : Sobic.005G064100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23315:SF135 - ARMADILLO/BETA-CATENIN-LIKE REPEAT AND C2 CALCIUM/LIPID-BINDING DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  639
Name:  ? Sobic.005G064100 Secondary Identifier:  ? PAC:37925656
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G064100 0.5kb upstream 0.5kb upstream 11661 true Chr05: 7033675-7045335 Sorghum bicolor
Sobic.005G064100 0.5kb upstream 0.5kb upstream 500 false Chr05: 7033675-7034174 Sorghum bicolor
Sobic.005G064100 0.5kb downstream 0.5kb downstream 11661 true Chr05: 7034175-7045835 Sorghum bicolor
Sobic.005G064100 0.5kb downstream 0.5kb downstream 500 false Chr05: 7045336-7045835 Sorghum bicolor
Sobic.005G064100 1.0kb upstream 1.0kb upstream 12161 true Chr05: 7033175-7045335 Sorghum bicolor
Sobic.005G064100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7033175-7034174 Sorghum bicolor
Sobic.005G064100 1.0kb downstream 1.0kb downstream 12161 true Chr05: 7034175-7046335 Sorghum bicolor
Sobic.005G064100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7045336-7046335 Sorghum bicolor
Sobic.005G064100 2.0kb upstream 2.0kb upstream 13161 true Chr05: 7032175-7045335 Sorghum bicolor
Sobic.005G064100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7032175-7034174 Sorghum bicolor
Sobic.005G064100 2.0kb downstream 2.0kb downstream 13161 true Chr05: 7034175-7047335 Sorghum bicolor
Sobic.005G064100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7045336-7047335 Sorghum bicolor
Sobic.005G064100 5.0kb upstream 5.0kb upstream 16161 true Chr05: 7029175-7045335 Sorghum bicolor
Sobic.005G064100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7029175-7034174 Sorghum bicolor
Sobic.005G064100 5.0kb downstream 5.0kb downstream 16161 true Chr05: 7034175-7050335 Sorghum bicolor
Sobic.005G064100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7045336-7050335 Sorghum bicolor
Sobic.005G064100 10.0kb upstream 10.0kb upstream 21161 true Chr05: 7024175-7045335 Sorghum bicolor
Sobic.005G064100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 7024175-7034174 Sorghum bicolor
Sobic.005G064100 10.0kb downstream 10.0kb downstream 21161 true Chr05: 7034175-7055335 Sorghum bicolor
Sobic.005G064100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7045336-7055335 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048106 5273 Angiosperm View MSA
122187452 5267 Panicoideae View MSA
124583203 5269 Grass View MSA
121347002 5274 Embryophyte View MSA
123380478 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.332        
cufflinks 0.272       Low
cufflinks 0.69       Low
cufflinks 1.016       Low
cufflinks 13.972     High High
cufflinks 1.006       Low
cufflinks 7.776        
cufflinks 2.813        
cufflinks 6.756        
cufflinks 5.826        
cufflinks 4.911        
cufflinks 7.344        
cufflinks 5.937        
cufflinks 7.407        
cufflinks 4.898        
cufflinks 0.299       Low
cufflinks 7.712        
cufflinks 7.124        
cufflinks 0.946       Low
cufflinks 9.032        
cufflinks 13.95       High
cufflinks 8.355        
cufflinks 8.081        
cufflinks 9.028        
cufflinks 1.032       Low
cufflinks 0.588       Low
cufflinks 4.308        
cufflinks 0.817       Low
cufflinks 5.186        
cufflinks 7.955        

0 Strain