Gene : Sobic.001G408500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR16127 - TAXILIN Genomic Order:  4278
Name:  ? Sobic.001G408500 Secondary Identifier:  ? PAC:37942800
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G408500 0.5kb upstream 0.5kb upstream 4391 true Chr01: 69239818-69244208 Sorghum bicolor
Sobic.001G408500 0.5kb upstream 0.5kb upstream 500 false Chr01: 69243709-69244208 Sorghum bicolor
Sobic.001G408500 0.5kb downstream 0.5kb downstream 4391 true Chr01: 69239318-69243708 Sorghum bicolor
Sobic.001G408500 0.5kb downstream 0.5kb downstream 500 false Chr01: 69239318-69239817 Sorghum bicolor
Sobic.001G408500 1.0kb upstream 1.0kb upstream 4891 true Chr01: 69239818-69244708 Sorghum bicolor
Sobic.001G408500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 69243709-69244708 Sorghum bicolor
Sobic.001G408500 1.0kb downstream 1.0kb downstream 4891 true Chr01: 69238818-69243708 Sorghum bicolor
Sobic.001G408500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 69238818-69239817 Sorghum bicolor
Sobic.001G408500 2.0kb upstream 2.0kb upstream 5891 true Chr01: 69239818-69245708 Sorghum bicolor
Sobic.001G408500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 69243709-69245708 Sorghum bicolor
Sobic.001G408500 2.0kb downstream 2.0kb downstream 5891 true Chr01: 69237818-69243708 Sorghum bicolor
Sobic.001G408500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 69237818-69239817 Sorghum bicolor
Sobic.001G408500 5.0kb upstream 5.0kb upstream 8891 true Chr01: 69239818-69248708 Sorghum bicolor
Sobic.001G408500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 69243709-69248708 Sorghum bicolor
Sobic.001G408500 5.0kb downstream 5.0kb downstream 8891 true Chr01: 69234818-69243708 Sorghum bicolor
Sobic.001G408500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 69234818-69239817 Sorghum bicolor
Sobic.001G408500 10.0kb upstream 10.0kb upstream 13891 true Chr01: 69239818-69253708 Sorghum bicolor
Sobic.001G408500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 69243709-69253708 Sorghum bicolor
Sobic.001G408500 10.0kb downstream 10.0kb downstream 13891 true Chr01: 69229818-69243708 Sorghum bicolor
Sobic.001G408500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 69229818-69239817 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195665 5267 Panicoideae View MSA
124573125 5269 Grass View MSA
122042784 5273 Angiosperm View MSA
121348664 5274 Embryophyte View MSA
123425640 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.118     High  
cufflinks 2.192       Low
cufflinks 4.04       Low
cufflinks 6.767        
cufflinks 14.306     High High
cufflinks 11.661        
cufflinks 8.009        
cufflinks 2.992       Low
cufflinks 14.026     High High
cufflinks 13.422     High  
cufflinks 9.652        
cufflinks 8.649        
cufflinks 10.713        
cufflinks 8.907        
cufflinks 9.017        
cufflinks 4.802       Low
cufflinks 7.255        
cufflinks 8.145        
cufflinks 4.493       Low
cufflinks 7.864        
cufflinks 21.245     High High
cufflinks 11.681        
cufflinks 10.011        
cufflinks 9.702        
cufflinks 3.291       Low
cufflinks 2.136       Low
cufflinks 8.717        
cufflinks 11.085     High  
cufflinks 6.298        
cufflinks 12.103     High  

0 Strain