Gene : Sobic.005G149400 S. bicolor v3.1.1
Defline:  (1 of 3) K06287 - septum formation protein (maf) Genomic Order:  1587
Name:  ? Sobic.005G149400 Secondary Identifier:  ? PAC:37923702
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G149400 0.5kb upstream 0.5kb upstream 4016 true Chr05: 61776677-61780692 Sorghum bicolor
Sobic.005G149400 0.5kb upstream 0.5kb upstream 500 false Chr05: 61780193-61780692 Sorghum bicolor
Sobic.005G149400 0.5kb downstream 0.5kb downstream 4016 true Chr05: 61776177-61780192 Sorghum bicolor
Sobic.005G149400 0.5kb downstream 0.5kb downstream 500 false Chr05: 61776177-61776676 Sorghum bicolor
Sobic.005G149400 1.0kb upstream 1.0kb upstream 4516 true Chr05: 61776677-61781192 Sorghum bicolor
Sobic.005G149400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 61780193-61781192 Sorghum bicolor
Sobic.005G149400 1.0kb downstream 1.0kb downstream 4516 true Chr05: 61775677-61780192 Sorghum bicolor
Sobic.005G149400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 61775677-61776676 Sorghum bicolor
Sobic.005G149400 2.0kb upstream 2.0kb upstream 5516 true Chr05: 61776677-61782192 Sorghum bicolor
Sobic.005G149400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 61780193-61782192 Sorghum bicolor
Sobic.005G149400 2.0kb downstream 2.0kb downstream 5516 true Chr05: 61774677-61780192 Sorghum bicolor
Sobic.005G149400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 61774677-61776676 Sorghum bicolor
Sobic.005G149400 5.0kb upstream 5.0kb upstream 8516 true Chr05: 61776677-61785192 Sorghum bicolor
Sobic.005G149400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 61780193-61785192 Sorghum bicolor
Sobic.005G149400 5.0kb downstream 5.0kb downstream 8516 true Chr05: 61771677-61780192 Sorghum bicolor
Sobic.005G149400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 61771677-61776676 Sorghum bicolor
Sobic.005G149400 10.0kb upstream 10.0kb upstream 13516 true Chr05: 61776677-61790192 Sorghum bicolor
Sobic.005G149400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 61780193-61790192 Sorghum bicolor
Sobic.005G149400 10.0kb downstream 10.0kb downstream 13516 true Chr05: 61766677-61780192 Sorghum bicolor
Sobic.005G149400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 61766677-61776676 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187804 5267 Panicoideae View MSA
124584749 5269 Grass View MSA
122045669 5273 Angiosperm View MSA
121347130 5274 Embryophyte View MSA
123427064 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.207        
cufflinks 2.919        
cufflinks 4.343        
cufflinks 5.198        
cufflinks 4.795        
cufflinks 9.284       High
cufflinks 4.35        
cufflinks 5.461        
cufflinks 7.049       High
cufflinks 5.67        
cufflinks 1.877       Low
cufflinks 2.414        
cufflinks 4.538        
cufflinks 1.529       Low
cufflinks 4.511        
cufflinks 5.94        
cufflinks 4.341        
cufflinks 5.011        
cufflinks 3.632        
cufflinks 5.547        
cufflinks 6.539       High
cufflinks 2.475        
cufflinks 2.12       Low
cufflinks 2.153       Low
cufflinks 3.774        
cufflinks 3.531        
cufflinks 1.605       Low
cufflinks 3.586        
cufflinks 8.185       High
cufflinks 4.404        

0 Strain