Gene : Sobic.005G149200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10566:SF59 - SERINE/THREONINE-PROTEIN KINASE ABKD-RELATED Genomic Order:  1585
Name:  ? Sobic.005G149200 Secondary Identifier:  ? PAC:37923771
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G149200 0.5kb upstream 0.5kb upstream 10976 true Chr05: 61761844-61772819 Sorghum bicolor
Sobic.005G149200 0.5kb upstream 0.5kb upstream 500 false Chr05: 61761844-61762343 Sorghum bicolor
Sobic.005G149200 0.5kb downstream 0.5kb downstream 10976 true Chr05: 61762344-61773319 Sorghum bicolor
Sobic.005G149200 0.5kb downstream 0.5kb downstream 500 false Chr05: 61772820-61773319 Sorghum bicolor
Sobic.005G149200 1.0kb upstream 1.0kb upstream 11476 true Chr05: 61761344-61772819 Sorghum bicolor
Sobic.005G149200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 61761344-61762343 Sorghum bicolor
Sobic.005G149200 1.0kb downstream 1.0kb downstream 11476 true Chr05: 61762344-61773819 Sorghum bicolor
Sobic.005G149200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 61772820-61773819 Sorghum bicolor
Sobic.005G149200 2.0kb upstream 2.0kb upstream 12476 true Chr05: 61760344-61772819 Sorghum bicolor
Sobic.005G149200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 61760344-61762343 Sorghum bicolor
Sobic.005G149200 2.0kb downstream 2.0kb downstream 12476 true Chr05: 61762344-61774819 Sorghum bicolor
Sobic.005G149200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 61772820-61774819 Sorghum bicolor
Sobic.005G149200 5.0kb upstream 5.0kb upstream 15476 true Chr05: 61757344-61772819 Sorghum bicolor
Sobic.005G149200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 61757344-61762343 Sorghum bicolor
Sobic.005G149200 5.0kb downstream 5.0kb downstream 15476 true Chr05: 61762344-61777819 Sorghum bicolor
Sobic.005G149200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 61772820-61777819 Sorghum bicolor
Sobic.005G149200 10.0kb upstream 10.0kb upstream 20476 true Chr05: 61752344-61772819 Sorghum bicolor
Sobic.005G149200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 61752344-61762343 Sorghum bicolor
Sobic.005G149200 10.0kb downstream 10.0kb downstream 20476 true Chr05: 61762344-61782819 Sorghum bicolor
Sobic.005G149200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 61772820-61782819 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186561 5267 Panicoideae View MSA
124573028 5269 Grass View MSA
122044074 5273 Angiosperm View MSA
121346722 5274 Embryophyte View MSA
123427066 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.481       Low
cufflinks 2.64        
cufflinks 2.047        
cufflinks 2.81        
cufflinks 1.82        
cufflinks 3.534       High
cufflinks 1.885        
cufflinks 1.324       Low
cufflinks 2.739        
cufflinks 2.856       High
cufflinks 1.904        
cufflinks 3.544       High
cufflinks 2.371        
cufflinks 2.265        
cufflinks 1.592        
cufflinks 2.049        
cufflinks 2.068        
cufflinks 2.129        
cufflinks 1.183       Low
cufflinks 2.874       High
cufflinks 2.579        
cufflinks 2.237        
cufflinks 3.124       High
cufflinks 2.724        
cufflinks 2.3        
cufflinks 2.034        
cufflinks 2.469        
cufflinks 1.449       Low
cufflinks 1.289       Low
cufflinks 1.913        

0 Strain