Gene : Sobic.001G392600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10682//PTHR10682:SF28 - POLY A POLYMERASE // SUBFAMILY NOT NAMED Genomic Order:  4108
Name:  ? Sobic.001G392600 Secondary Identifier:  ? PAC:37943791
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G392600 0.5kb upstream 0.5kb upstream 6700 true Chr01: 67879888-67886587 Sorghum bicolor
Sobic.001G392600 0.5kb upstream 0.5kb upstream 500 false Chr01: 67879888-67880387 Sorghum bicolor
Sobic.001G392600 0.5kb downstream 0.5kb downstream 6700 true Chr01: 67880388-67887087 Sorghum bicolor
Sobic.001G392600 0.5kb downstream 0.5kb downstream 500 false Chr01: 67886588-67887087 Sorghum bicolor
Sobic.001G392600 1.0kb upstream 1.0kb upstream 7200 true Chr01: 67879388-67886587 Sorghum bicolor
Sobic.001G392600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 67879388-67880387 Sorghum bicolor
Sobic.001G392600 1.0kb downstream 1.0kb downstream 7200 true Chr01: 67880388-67887587 Sorghum bicolor
Sobic.001G392600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 67886588-67887587 Sorghum bicolor
Sobic.001G392600 2.0kb upstream 2.0kb upstream 8200 true Chr01: 67878388-67886587 Sorghum bicolor
Sobic.001G392600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 67878388-67880387 Sorghum bicolor
Sobic.001G392600 2.0kb downstream 2.0kb downstream 8200 true Chr01: 67880388-67888587 Sorghum bicolor
Sobic.001G392600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 67886588-67888587 Sorghum bicolor
Sobic.001G392600 5.0kb upstream 5.0kb upstream 11200 true Chr01: 67875388-67886587 Sorghum bicolor
Sobic.001G392600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 67875388-67880387 Sorghum bicolor
Sobic.001G392600 5.0kb downstream 5.0kb downstream 11200 true Chr01: 67880388-67891587 Sorghum bicolor
Sobic.001G392600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 67886588-67891587 Sorghum bicolor
Sobic.001G392600 10.0kb upstream 10.0kb upstream 16200 true Chr01: 67870388-67886587 Sorghum bicolor
Sobic.001G392600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 67870388-67880387 Sorghum bicolor
Sobic.001G392600 10.0kb downstream 10.0kb downstream 16200 true Chr01: 67880388-67896587 Sorghum bicolor
Sobic.001G392600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 67886588-67896587 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027667 5273 Angiosperm View MSA
122188101 5267 Panicoideae View MSA
124568666 5269 Grass View MSA
123429108 5275 Viridiplantae View MSA
121351142 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.55       Low
cufflinks 0.851        
cufflinks 1.681        
cufflinks 1.732        
cufflinks 3.552       High
cufflinks 1.087        
cufflinks 0.587       Low
cufflinks 0.597       Low
cufflinks 1.259        
cufflinks 1.537        
cufflinks 1.256        
cufflinks 1.266        
cufflinks 1.838        
cufflinks 1.179        
cufflinks 1.581        
cufflinks 0.956        
cufflinks 0.64       Low
cufflinks 0.624       Low
cufflinks 1.232        
cufflinks 0.714       Low
cufflinks 1.764        
cufflinks 1.064        
cufflinks 1.061        
cufflinks 1.156        
cufflinks 0.71       Low
cufflinks 0.56       Low
cufflinks 2.933       High
cufflinks 1.134        
cufflinks 0.67       Low
cufflinks 1.524        

0 Strain