Gene : Sobic.001G395800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31460//PTHR31460:SF0 - FAMILY NOT NAMED // EXPRESSED PROTEIN-RELATED Genomic Order:  4142
Name:  ? Sobic.001G395800 Secondary Identifier:  ? PAC:37944792
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G395800 0.5kb upstream 0.5kb upstream 2628 true Chr01: 68151674-68154301 Sorghum bicolor
Sobic.001G395800 0.5kb upstream 0.5kb upstream 500 false Chr01: 68153802-68154301 Sorghum bicolor
Sobic.001G395800 0.5kb downstream 0.5kb downstream 2628 true Chr01: 68151174-68153801 Sorghum bicolor
Sobic.001G395800 0.5kb downstream 0.5kb downstream 500 false Chr01: 68151174-68151673 Sorghum bicolor
Sobic.001G395800 1.0kb upstream 1.0kb upstream 3128 true Chr01: 68151674-68154801 Sorghum bicolor
Sobic.001G395800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 68153802-68154801 Sorghum bicolor
Sobic.001G395800 1.0kb downstream 1.0kb downstream 3128 true Chr01: 68150674-68153801 Sorghum bicolor
Sobic.001G395800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 68150674-68151673 Sorghum bicolor
Sobic.001G395800 2.0kb upstream 2.0kb upstream 4128 true Chr01: 68151674-68155801 Sorghum bicolor
Sobic.001G395800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 68153802-68155801 Sorghum bicolor
Sobic.001G395800 2.0kb downstream 2.0kb downstream 4128 true Chr01: 68149674-68153801 Sorghum bicolor
Sobic.001G395800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 68149674-68151673 Sorghum bicolor
Sobic.001G395800 5.0kb upstream 5.0kb upstream 7128 true Chr01: 68151674-68158801 Sorghum bicolor
Sobic.001G395800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 68153802-68158801 Sorghum bicolor
Sobic.001G395800 5.0kb downstream 5.0kb downstream 7128 true Chr01: 68146674-68153801 Sorghum bicolor
Sobic.001G395800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 68146674-68151673 Sorghum bicolor
Sobic.001G395800 10.0kb upstream 10.0kb upstream 12128 true Chr01: 68151674-68163801 Sorghum bicolor
Sobic.001G395800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 68153802-68163801 Sorghum bicolor
Sobic.001G395800 10.0kb downstream 10.0kb downstream 12128 true Chr01: 68141674-68153801 Sorghum bicolor
Sobic.001G395800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 68141674-68151673 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191670 5267 Panicoideae View MSA
124577549 5269 Grass View MSA
122044285 5273 Angiosperm View MSA
121351602 5274 Embryophyte View MSA
123382243 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.55        
cufflinks 0.586        
cufflinks 0.71        
cufflinks 2.065        
cufflinks 1.592        
cufflinks 0.566        
cufflinks 1.162        
cufflinks 0.282       Low
cufflinks 0.624        
cufflinks 0.231       Low
cufflinks 16.536     High High
cufflinks 17.23     High High
cufflinks 0.411        
cufflinks 16.189     High High
cufflinks 1.178        
cufflinks 0.588        
cufflinks 1.001        
cufflinks 0.707        
cufflinks 0.548        
cufflinks 1.334        
cufflinks 0.189       Low
cufflinks 19.364     High High
cufflinks 14.447     High High
cufflinks 13.896     High High
cufflinks 0.622        
cufflinks 0.427        
cufflinks 6.172        
cufflinks 0.68        
cufflinks 0.379        
cufflinks 0.331       Low

0 Strain