Gene : Sobic.005G164700 S. bicolor v3.1.1
Defline:  (1 of 1) K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) Genomic Order:  1744
Name:  ? Sobic.005G164700 Secondary Identifier:  ? PAC:37923490
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G164700 0.5kb upstream 0.5kb upstream 2736 true Chr05: 64008802-64011537 Sorghum bicolor
Sobic.005G164700 0.5kb upstream 0.5kb upstream 500 false Chr05: 64008802-64009301 Sorghum bicolor
Sobic.005G164700 0.5kb downstream 0.5kb downstream 2736 true Chr05: 64009302-64012037 Sorghum bicolor
Sobic.005G164700 0.5kb downstream 0.5kb downstream 500 false Chr05: 64011538-64012037 Sorghum bicolor
Sobic.005G164700 1.0kb upstream 1.0kb upstream 3236 true Chr05: 64008302-64011537 Sorghum bicolor
Sobic.005G164700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 64008302-64009301 Sorghum bicolor
Sobic.005G164700 1.0kb downstream 1.0kb downstream 3236 true Chr05: 64009302-64012537 Sorghum bicolor
Sobic.005G164700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 64011538-64012537 Sorghum bicolor
Sobic.005G164700 2.0kb upstream 2.0kb upstream 4236 true Chr05: 64007302-64011537 Sorghum bicolor
Sobic.005G164700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 64007302-64009301 Sorghum bicolor
Sobic.005G164700 2.0kb downstream 2.0kb downstream 4236 true Chr05: 64009302-64013537 Sorghum bicolor
Sobic.005G164700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 64011538-64013537 Sorghum bicolor
Sobic.005G164700 5.0kb upstream 5.0kb upstream 7236 true Chr05: 64004302-64011537 Sorghum bicolor
Sobic.005G164700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 64004302-64009301 Sorghum bicolor
Sobic.005G164700 5.0kb downstream 5.0kb downstream 7236 true Chr05: 64009302-64016537 Sorghum bicolor
Sobic.005G164700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 64011538-64016537 Sorghum bicolor
Sobic.005G164700 10.0kb upstream 10.0kb upstream 12236 true Chr05: 63999302-64011537 Sorghum bicolor
Sobic.005G164700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 63999302-64009301 Sorghum bicolor
Sobic.005G164700 10.0kb downstream 10.0kb downstream 12236 true Chr05: 64009302-64021537 Sorghum bicolor
Sobic.005G164700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 64011538-64021537 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182211 5267 Panicoideae View MSA
124570254 5269 Grass View MSA
122045887 5273 Angiosperm View MSA
121346687 5274 Embryophyte View MSA
123425060 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 62.819     High High
cufflinks 0.132       Low
cufflinks 0.531       Low
cufflinks 1.619        
cufflinks 8.128        
cufflinks 3.329        
cufflinks 4.926        
cufflinks 0.399       Low
cufflinks 5.605        
cufflinks 5.412        
cufflinks 11.194        
cufflinks 6.385        
cufflinks 2.123        
cufflinks 7.934        
cufflinks 2.381        
cufflinks 0.522       Low
cufflinks 5.907        
cufflinks 6.969        
cufflinks 0.537       Low
cufflinks 3.427        
cufflinks 14.046        
cufflinks 19.829     High High
cufflinks 9.916        
cufflinks 11.431     High  
cufflinks 0.173       Low
cufflinks 0.045       Low
cufflinks 4.571        
cufflinks 9.511        
cufflinks 3.061        
cufflinks 5.688        

0 Strain