Gene : Sobic.001G382500 S. bicolor v3.1.1
Defline:  (1 of 1) K14569 - ribosome biogenesis protein BMS1 (BMS1) Genomic Order:  4010
Name:  ? Sobic.001G382500 Secondary Identifier:  ? PAC:37942200
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G382500 0.5kb upstream 0.5kb upstream 9396 true Chr01: 67020993-67030388 Sorghum bicolor
Sobic.001G382500 0.5kb upstream 0.5kb upstream 500 false Chr01: 67029889-67030388 Sorghum bicolor
Sobic.001G382500 0.5kb downstream 0.5kb downstream 9396 true Chr01: 67020493-67029888 Sorghum bicolor
Sobic.001G382500 0.5kb downstream 0.5kb downstream 500 false Chr01: 67020493-67020992 Sorghum bicolor
Sobic.001G382500 1.0kb upstream 1.0kb upstream 9896 true Chr01: 67020993-67030888 Sorghum bicolor
Sobic.001G382500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 67029889-67030888 Sorghum bicolor
Sobic.001G382500 1.0kb downstream 1.0kb downstream 9896 true Chr01: 67019993-67029888 Sorghum bicolor
Sobic.001G382500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 67019993-67020992 Sorghum bicolor
Sobic.001G382500 2.0kb upstream 2.0kb upstream 10896 true Chr01: 67020993-67031888 Sorghum bicolor
Sobic.001G382500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 67029889-67031888 Sorghum bicolor
Sobic.001G382500 2.0kb downstream 2.0kb downstream 10896 true Chr01: 67018993-67029888 Sorghum bicolor
Sobic.001G382500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 67018993-67020992 Sorghum bicolor
Sobic.001G382500 5.0kb upstream 5.0kb upstream 13896 true Chr01: 67020993-67034888 Sorghum bicolor
Sobic.001G382500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 67029889-67034888 Sorghum bicolor
Sobic.001G382500 5.0kb downstream 5.0kb downstream 13896 true Chr01: 67015993-67029888 Sorghum bicolor
Sobic.001G382500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 67015993-67020992 Sorghum bicolor
Sobic.001G382500 10.0kb upstream 10.0kb upstream 18896 true Chr01: 67020993-67039888 Sorghum bicolor
Sobic.001G382500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 67029889-67039888 Sorghum bicolor
Sobic.001G382500 10.0kb downstream 10.0kb downstream 18896 true Chr01: 67010993-67029888 Sorghum bicolor
Sobic.001G382500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 67010993-67020992 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191501 5267 Panicoideae View MSA
124574767 5269 Grass View MSA
122050261 5273 Angiosperm View MSA
121345125 5274 Embryophyte View MSA
123424272 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.124        
cufflinks 0.264       Low
cufflinks 1.049       Low
cufflinks 1.902        
cufflinks 6.709        
cufflinks 2.708        
cufflinks 2.775        
cufflinks 0.429       Low
cufflinks 5.337        
cufflinks 4.456        
cufflinks 6.089        
cufflinks 5.546        
cufflinks 2.53        
cufflinks 5.654        
cufflinks 2.984        
cufflinks 0.788       Low
cufflinks 2.851        
cufflinks 3.138        
cufflinks 1.589        
cufflinks 2.601        
cufflinks 15.124     High High
cufflinks 6.78        
cufflinks 6.485        
cufflinks 6.806        
cufflinks 0.618       Low
cufflinks 0.239       Low
cufflinks 3.832        
cufflinks 11.581     High High
cufflinks 1.573        
cufflinks 5.482        

0 Strain