Gene : Sobic.001G370100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR15672//PTHR15672:SF16 - CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3876
Name:  ? Sobic.001G370100 Secondary Identifier:  ? PAC:37939832
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G370100 0.5kb upstream 0.5kb upstream 3790 true Chr01: 65852307-65856096 Sorghum bicolor
Sobic.001G370100 0.5kb upstream 0.5kb upstream 500 false Chr01: 65852307-65852806 Sorghum bicolor
Sobic.001G370100 0.5kb downstream 0.5kb downstream 3790 true Chr01: 65852807-65856596 Sorghum bicolor
Sobic.001G370100 0.5kb downstream 0.5kb downstream 500 false Chr01: 65856097-65856596 Sorghum bicolor
Sobic.001G370100 1.0kb upstream 1.0kb upstream 4290 true Chr01: 65851807-65856096 Sorghum bicolor
Sobic.001G370100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 65851807-65852806 Sorghum bicolor
Sobic.001G370100 1.0kb downstream 1.0kb downstream 4290 true Chr01: 65852807-65857096 Sorghum bicolor
Sobic.001G370100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 65856097-65857096 Sorghum bicolor
Sobic.001G370100 2.0kb upstream 2.0kb upstream 5290 true Chr01: 65850807-65856096 Sorghum bicolor
Sobic.001G370100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 65850807-65852806 Sorghum bicolor
Sobic.001G370100 2.0kb downstream 2.0kb downstream 5290 true Chr01: 65852807-65858096 Sorghum bicolor
Sobic.001G370100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 65856097-65858096 Sorghum bicolor
Sobic.001G370100 5.0kb upstream 5.0kb upstream 8290 true Chr01: 65847807-65856096 Sorghum bicolor
Sobic.001G370100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 65847807-65852806 Sorghum bicolor
Sobic.001G370100 5.0kb downstream 5.0kb downstream 8290 true Chr01: 65852807-65861096 Sorghum bicolor
Sobic.001G370100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 65856097-65861096 Sorghum bicolor
Sobic.001G370100 10.0kb upstream 10.0kb upstream 13290 true Chr01: 65842807-65856096 Sorghum bicolor
Sobic.001G370100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 65842807-65852806 Sorghum bicolor
Sobic.001G370100 10.0kb downstream 10.0kb downstream 13290 true Chr01: 65852807-65866096 Sorghum bicolor
Sobic.001G370100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 65856097-65866096 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026852 5273 Angiosperm View MSA
122178120 5267 Panicoideae View MSA
124571173 5269 Grass View MSA
121349611 5274 Embryophyte View MSA
123381379 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.421        
cufflinks 1.724       Low
cufflinks 1.351       Low
cufflinks 2.122        
cufflinks 2.363        
cufflinks 5.129       High
cufflinks 4.016        
cufflinks 3.242        
cufflinks 7.549       High
cufflinks 6.796       High
cufflinks 2.21        
cufflinks 4.143        
cufflinks 4.756       High
cufflinks 2.8        
cufflinks 2.935        
cufflinks 1.9        
cufflinks 3.902        
cufflinks 4.24        
cufflinks 1.537       Low
cufflinks 5.09       High
cufflinks 4.131        
cufflinks 2.448        
cufflinks 2.759        
cufflinks 3.037        
cufflinks 2.582        
cufflinks 2.078        
cufflinks 2.234        
cufflinks 8.824       High
cufflinks 4.003        
cufflinks 3.078        

0 Strain