Gene : Sobic.001G366000 S. bicolor v3.1.1
Defline:  (1 of 9) 3.4.19.12//3.4.22.69 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase // SARS coronavirus main proteinase / Severe acute respiratory syndrome coronavirus main protease Genomic Order:  3837
Name:  ? Sobic.001G366000 Secondary Identifier:  ? PAC:37938310
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G366000 0.5kb upstream 0.5kb upstream 1358 true Chr01: 65464614-65465971 Sorghum bicolor
Sobic.001G366000 0.5kb upstream 0.5kb upstream 500 false Chr01: 65464614-65465113 Sorghum bicolor
Sobic.001G366000 0.5kb downstream 0.5kb downstream 1358 true Chr01: 65465114-65466471 Sorghum bicolor
Sobic.001G366000 0.5kb downstream 0.5kb downstream 500 false Chr01: 65465972-65466471 Sorghum bicolor
Sobic.001G366000 1.0kb upstream 1.0kb upstream 1858 true Chr01: 65464114-65465971 Sorghum bicolor
Sobic.001G366000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 65464114-65465113 Sorghum bicolor
Sobic.001G366000 1.0kb downstream 1.0kb downstream 1858 true Chr01: 65465114-65466971 Sorghum bicolor
Sobic.001G366000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 65465972-65466971 Sorghum bicolor
Sobic.001G366000 2.0kb upstream 2.0kb upstream 2858 true Chr01: 65463114-65465971 Sorghum bicolor
Sobic.001G366000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 65463114-65465113 Sorghum bicolor
Sobic.001G366000 2.0kb downstream 2.0kb downstream 2858 true Chr01: 65465114-65467971 Sorghum bicolor
Sobic.001G366000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 65465972-65467971 Sorghum bicolor
Sobic.001G366000 5.0kb upstream 5.0kb upstream 5858 true Chr01: 65460114-65465971 Sorghum bicolor
Sobic.001G366000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 65460114-65465113 Sorghum bicolor
Sobic.001G366000 5.0kb downstream 5.0kb downstream 5858 true Chr01: 65465114-65470971 Sorghum bicolor
Sobic.001G366000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 65465972-65470971 Sorghum bicolor
Sobic.001G366000 10.0kb upstream 10.0kb upstream 10858 true Chr01: 65455114-65465971 Sorghum bicolor
Sobic.001G366000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 65455114-65465113 Sorghum bicolor
Sobic.001G366000 10.0kb downstream 10.0kb downstream 10858 true Chr01: 65465114-65475971 Sorghum bicolor
Sobic.001G366000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 65465972-65475971 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195365 5267 Panicoideae View MSA
124585602 5269 Grass View MSA
122048753 5273 Angiosperm View MSA
121311096 5274 Embryophyte View MSA
123348442 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.156       High
cufflinks 0.018     Low Low
cufflinks 0.016     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.05     Low  
cufflinks 0.04     Low  
cufflinks 0.057     Low  
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.087     Low  
cufflinks 0.026     Low  
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.059     Low  
cufflinks 0.029     Low  
cufflinks 0.09     Low  
cufflinks 0.061     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.054     Low  
cufflinks 0.052     Low  
cufflinks 0.035     Low  
cufflinks 0.017     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.113        
cufflinks 1.405       High
cufflinks 0.094        
cufflinks 0.012     Low Low

0 Strain