Gene : Sobic.001G368500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11655//PTHR11655:SF14 - 60S/50S RIBOSOMAL PROTEIN L6/L9 // 54S RIBOSOMAL PROTEIN L6, MITOCHONDRIAL Genomic Order:  3859
Name:  ? Sobic.001G368500 Secondary Identifier:  ? PAC:37943614
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G368500 0.5kb upstream 0.5kb upstream 3613 true Chr01: 65726381-65729993 Sorghum bicolor
Sobic.001G368500 0.5kb upstream 0.5kb upstream 500 false Chr01: 65726381-65726880 Sorghum bicolor
Sobic.001G368500 0.5kb downstream 0.5kb downstream 3613 true Chr01: 65726881-65730493 Sorghum bicolor
Sobic.001G368500 0.5kb downstream 0.5kb downstream 500 false Chr01: 65729994-65730493 Sorghum bicolor
Sobic.001G368500 1.0kb upstream 1.0kb upstream 4113 true Chr01: 65725881-65729993 Sorghum bicolor
Sobic.001G368500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 65725881-65726880 Sorghum bicolor
Sobic.001G368500 1.0kb downstream 1.0kb downstream 4113 true Chr01: 65726881-65730993 Sorghum bicolor
Sobic.001G368500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 65729994-65730993 Sorghum bicolor
Sobic.001G368500 2.0kb upstream 2.0kb upstream 5113 true Chr01: 65724881-65729993 Sorghum bicolor
Sobic.001G368500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 65724881-65726880 Sorghum bicolor
Sobic.001G368500 2.0kb downstream 2.0kb downstream 5113 true Chr01: 65726881-65731993 Sorghum bicolor
Sobic.001G368500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 65729994-65731993 Sorghum bicolor
Sobic.001G368500 5.0kb upstream 5.0kb upstream 8113 true Chr01: 65721881-65729993 Sorghum bicolor
Sobic.001G368500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 65721881-65726880 Sorghum bicolor
Sobic.001G368500 5.0kb downstream 5.0kb downstream 8113 true Chr01: 65726881-65734993 Sorghum bicolor
Sobic.001G368500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 65729994-65734993 Sorghum bicolor
Sobic.001G368500 10.0kb upstream 10.0kb upstream 13113 true Chr01: 65716881-65729993 Sorghum bicolor
Sobic.001G368500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 65716881-65726880 Sorghum bicolor
Sobic.001G368500 10.0kb downstream 10.0kb downstream 13113 true Chr01: 65726881-65739993 Sorghum bicolor
Sobic.001G368500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 65729994-65739993 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175354 5267 Panicoideae View MSA
124573754 5269 Grass View MSA
122045909 5273 Angiosperm View MSA
121344403 5274 Embryophyte View MSA
123424152 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.776        
cufflinks 122.168     High High
cufflinks 96.943     High High
cufflinks 34.88     High  
cufflinks 9.954        
cufflinks 30.268     High  
cufflinks 152.099     High High
cufflinks 183.357     High High
cufflinks 7.581        
cufflinks 6.469        
cufflinks 3.476       Low
cufflinks 4.12       Low
cufflinks 7.911        
cufflinks 3.532       Low
cufflinks 22.969     High  
cufflinks 121.529     High High
cufflinks 155.831     High High
cufflinks 198.952     High High
cufflinks 69.717     High  
cufflinks 92.28     High High
cufflinks 8.63        
cufflinks 3.23       Low
cufflinks 4.421        
cufflinks 4.747        
cufflinks 46.486     High  
cufflinks 85.48     High High
cufflinks 4.674        
cufflinks 2.298       Low
cufflinks 272.309     High High
cufflinks 22.543     High  

0 Strain