Gene : Sobic.001G486500 S. bicolor v3.1.1
Defline:  (1 of 1) 2.8.1.4//2.8.1.7 - tRNA sulfurtransferase // Cysteine desulfurase / Cysteine desulfurylase Genomic Order:  5102
Name:  ? Sobic.001G486500 Secondary Identifier:  ? PAC:37938691
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY0-1021 Sorghum bicolor pathologic  
Sbicolor PWY-6823 Sorghum bicolor pathologic  
Sbicolor PWY-7250 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G486500 0.5kb upstream 0.5kb upstream 9105 true Chr01: 75698271-75707375 Sorghum bicolor
Sobic.001G486500 0.5kb upstream 0.5kb upstream 500 false Chr01: 75706876-75707375 Sorghum bicolor
Sobic.001G486500 0.5kb downstream 0.5kb downstream 9105 true Chr01: 75697771-75706875 Sorghum bicolor
Sobic.001G486500 0.5kb downstream 0.5kb downstream 500 false Chr01: 75697771-75698270 Sorghum bicolor
Sobic.001G486500 1.0kb upstream 1.0kb upstream 9605 true Chr01: 75698271-75707875 Sorghum bicolor
Sobic.001G486500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 75706876-75707875 Sorghum bicolor
Sobic.001G486500 1.0kb downstream 1.0kb downstream 9605 true Chr01: 75697271-75706875 Sorghum bicolor
Sobic.001G486500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 75697271-75698270 Sorghum bicolor
Sobic.001G486500 2.0kb upstream 2.0kb upstream 10605 true Chr01: 75698271-75708875 Sorghum bicolor
Sobic.001G486500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 75706876-75708875 Sorghum bicolor
Sobic.001G486500 2.0kb downstream 2.0kb downstream 10605 true Chr01: 75696271-75706875 Sorghum bicolor
Sobic.001G486500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 75696271-75698270 Sorghum bicolor
Sobic.001G486500 5.0kb upstream 5.0kb upstream 13605 true Chr01: 75698271-75711875 Sorghum bicolor
Sobic.001G486500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 75706876-75711875 Sorghum bicolor
Sobic.001G486500 5.0kb downstream 5.0kb downstream 13605 true Chr01: 75693271-75706875 Sorghum bicolor
Sobic.001G486500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 75693271-75698270 Sorghum bicolor
Sobic.001G486500 10.0kb upstream 10.0kb upstream 18605 true Chr01: 75698271-75716875 Sorghum bicolor
Sobic.001G486500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 75706876-75716875 Sorghum bicolor
Sobic.001G486500 10.0kb downstream 10.0kb downstream 18605 true Chr01: 75688271-75706875 Sorghum bicolor
Sobic.001G486500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 75688271-75698270 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189990 5267 Panicoideae View MSA
124571246 5269 Grass View MSA
122044530 5273 Angiosperm View MSA
121345192 5274 Embryophyte View MSA
123427133 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.44        
cufflinks 0.179       Low
cufflinks 0.77       High
cufflinks 1.217       High
cufflinks 0.403        
cufflinks 0.638        
cufflinks 0.492        
cufflinks 0.27        
cufflinks 0.85       High
cufflinks 0.748       High
cufflinks 0.289        
cufflinks 0.431        
cufflinks 0.326        
cufflinks 0.272        
cufflinks 0.297        
cufflinks 0.348        
cufflinks 0.523        
cufflinks 0.659       High
cufflinks 0.301        
cufflinks 0.671       High
cufflinks 0.554        
cufflinks 0.235        
cufflinks 0.273        
cufflinks 0.264        
cufflinks 0.413        
cufflinks 0.132       Low
cufflinks 0.499        
cufflinks 0.46        
cufflinks 0.808       High
cufflinks 0.369        

0 Strain