Gene : Sobic.001G479800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11183:SF44 - UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 Genomic Order:  5038
Name:  ? Sobic.001G479800 Secondary Identifier:  ? PAC:37938772
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G479800 0.5kb upstream 0.5kb upstream 5512 true Chr01: 75151132-75156643 Sorghum bicolor
Sobic.001G479800 0.5kb upstream 0.5kb upstream 500 false Chr01: 75156144-75156643 Sorghum bicolor
Sobic.001G479800 0.5kb downstream 0.5kb downstream 5512 true Chr01: 75150632-75156143 Sorghum bicolor
Sobic.001G479800 0.5kb downstream 0.5kb downstream 500 false Chr01: 75150632-75151131 Sorghum bicolor
Sobic.001G479800 1.0kb upstream 1.0kb upstream 6012 true Chr01: 75151132-75157143 Sorghum bicolor
Sobic.001G479800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 75156144-75157143 Sorghum bicolor
Sobic.001G479800 1.0kb downstream 1.0kb downstream 6012 true Chr01: 75150132-75156143 Sorghum bicolor
Sobic.001G479800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 75150132-75151131 Sorghum bicolor
Sobic.001G479800 2.0kb upstream 2.0kb upstream 7012 true Chr01: 75151132-75158143 Sorghum bicolor
Sobic.001G479800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 75156144-75158143 Sorghum bicolor
Sobic.001G479800 2.0kb downstream 2.0kb downstream 7012 true Chr01: 75149132-75156143 Sorghum bicolor
Sobic.001G479800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 75149132-75151131 Sorghum bicolor
Sobic.001G479800 5.0kb upstream 5.0kb upstream 10012 true Chr01: 75151132-75161143 Sorghum bicolor
Sobic.001G479800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 75156144-75161143 Sorghum bicolor
Sobic.001G479800 5.0kb downstream 5.0kb downstream 10012 true Chr01: 75146132-75156143 Sorghum bicolor
Sobic.001G479800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 75146132-75151131 Sorghum bicolor
Sobic.001G479800 10.0kb upstream 10.0kb upstream 15012 true Chr01: 75151132-75166143 Sorghum bicolor
Sobic.001G479800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 75156144-75166143 Sorghum bicolor
Sobic.001G479800 10.0kb downstream 10.0kb downstream 15012 true Chr01: 75141132-75156143 Sorghum bicolor
Sobic.001G479800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 75141132-75151131 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188174 5267 Panicoideae View MSA
124568280 5269 Grass View MSA
122049566 5273 Angiosperm View MSA
121311478 5274 Embryophyte View MSA
123348771 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.038     Low Low
cufflinks 1.028        
cufflinks 0.118       Low
cufflinks 0.146       Low
cufflinks 0.48        
cufflinks 3.512        
cufflinks 2.722        
cufflinks 11.453     High High
cufflinks 0.911        
cufflinks 0.523        
cufflinks 2.757        
cufflinks 1.976        
cufflinks 4.742        
cufflinks 2.469        
cufflinks 2.291        
cufflinks 0.479        
cufflinks 2.377        
cufflinks 2.569        
cufflinks 3.007        
cufflinks 1.479        
cufflinks 0.024     Low Low
cufflinks 1.348        
cufflinks 1.633        
cufflinks 1.543        
cufflinks 0.531        
cufflinks 1.537        
cufflinks 1.677        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 9.261       High
cufflinks 1.035        

0 Strain