Gene : Sobic.001G456500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Genomic Order:  4793
Name:  ? Sobic.001G456500 Secondary Identifier:  ? PAC:37942042
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G456500 0.5kb upstream 0.5kb upstream 4133 true Chr01: 73275333-73279465 Sorghum bicolor
Sobic.001G456500 0.5kb upstream 0.5kb upstream 500 false Chr01: 73278966-73279465 Sorghum bicolor
Sobic.001G456500 0.5kb downstream 0.5kb downstream 4133 true Chr01: 73274833-73278965 Sorghum bicolor
Sobic.001G456500 0.5kb downstream 0.5kb downstream 500 false Chr01: 73274833-73275332 Sorghum bicolor
Sobic.001G456500 1.0kb upstream 1.0kb upstream 4633 true Chr01: 73275333-73279965 Sorghum bicolor
Sobic.001G456500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 73278966-73279965 Sorghum bicolor
Sobic.001G456500 1.0kb downstream 1.0kb downstream 4633 true Chr01: 73274333-73278965 Sorghum bicolor
Sobic.001G456500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 73274333-73275332 Sorghum bicolor
Sobic.001G456500 2.0kb upstream 2.0kb upstream 5633 true Chr01: 73275333-73280965 Sorghum bicolor
Sobic.001G456500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 73278966-73280965 Sorghum bicolor
Sobic.001G456500 2.0kb downstream 2.0kb downstream 5633 true Chr01: 73273333-73278965 Sorghum bicolor
Sobic.001G456500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 73273333-73275332 Sorghum bicolor
Sobic.001G456500 5.0kb upstream 5.0kb upstream 8633 true Chr01: 73275333-73283965 Sorghum bicolor
Sobic.001G456500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 73278966-73283965 Sorghum bicolor
Sobic.001G456500 5.0kb downstream 5.0kb downstream 8633 true Chr01: 73270333-73278965 Sorghum bicolor
Sobic.001G456500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 73270333-73275332 Sorghum bicolor
Sobic.001G456500 10.0kb upstream 10.0kb upstream 13633 true Chr01: 73275333-73288965 Sorghum bicolor
Sobic.001G456500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 73278966-73288965 Sorghum bicolor
Sobic.001G456500 10.0kb downstream 10.0kb downstream 13633 true Chr01: 73265333-73278965 Sorghum bicolor
Sobic.001G456500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 73265333-73275332 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175312 5267 Panicoideae View MSA
124573442 5269 Grass View MSA
122046944 5273 Angiosperm View MSA
121346353 5274 Embryophyte View MSA
123426361 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.084     High  
cufflinks 0.044       Low
cufflinks 0.016     Low Low
cufflinks 0.026     Low Low
cufflinks 20.323     High  
cufflinks 0.476        
cufflinks 24.679     High  
cufflinks 0.932        
cufflinks 1.485        
cufflinks 4.748        
cufflinks 22.422     High  
cufflinks 17.703     High  
cufflinks 1.284        
cufflinks 20.479     High  
cufflinks 14.62     High  
cufflinks 0.056     Low Low
cufflinks 24.938     High  
cufflinks 28.666     High  
cufflinks 0.195       Low
cufflinks 13.519     High  
cufflinks 56.645     High High
cufflinks 31.242     High  
cufflinks 25.694     High  
cufflinks 29.392     High  
cufflinks 0.036     Low Low
cufflinks 0.032     Low Low
cufflinks 7.024        
cufflinks 0.05     Low Low
cufflinks 1.046        
cufflinks 32.366     High  

0 Strain