Gene : Sobic.001G441700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31062:SF44 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATED Genomic Order:  4632
Name:  ? Sobic.001G441700 Secondary Identifier:  ? PAC:37940838
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G441700 0.5kb upstream 0.5kb upstream 4158 true Chr01: 71946138-71950295 Sorghum bicolor
Sobic.001G441700 0.5kb upstream 0.5kb upstream 500 false Chr01: 71946138-71946637 Sorghum bicolor
Sobic.001G441700 0.5kb downstream 0.5kb downstream 4158 true Chr01: 71946638-71950795 Sorghum bicolor
Sobic.001G441700 0.5kb downstream 0.5kb downstream 500 false Chr01: 71950296-71950795 Sorghum bicolor
Sobic.001G441700 1.0kb upstream 1.0kb upstream 4658 true Chr01: 71945638-71950295 Sorghum bicolor
Sobic.001G441700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 71945638-71946637 Sorghum bicolor
Sobic.001G441700 1.0kb downstream 1.0kb downstream 4658 true Chr01: 71946638-71951295 Sorghum bicolor
Sobic.001G441700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 71950296-71951295 Sorghum bicolor
Sobic.001G441700 2.0kb upstream 2.0kb upstream 5658 true Chr01: 71944638-71950295 Sorghum bicolor
Sobic.001G441700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 71944638-71946637 Sorghum bicolor
Sobic.001G441700 2.0kb downstream 2.0kb downstream 5658 true Chr01: 71946638-71952295 Sorghum bicolor
Sobic.001G441700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 71950296-71952295 Sorghum bicolor
Sobic.001G441700 5.0kb upstream 5.0kb upstream 8658 true Chr01: 71941638-71950295 Sorghum bicolor
Sobic.001G441700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 71941638-71946637 Sorghum bicolor
Sobic.001G441700 5.0kb downstream 5.0kb downstream 8658 true Chr01: 71946638-71955295 Sorghum bicolor
Sobic.001G441700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 71950296-71955295 Sorghum bicolor
Sobic.001G441700 10.0kb upstream 10.0kb upstream 13658 true Chr01: 71936638-71950295 Sorghum bicolor
Sobic.001G441700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 71936638-71946637 Sorghum bicolor
Sobic.001G441700 10.0kb downstream 10.0kb downstream 13658 true Chr01: 71946638-71960295 Sorghum bicolor
Sobic.001G441700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 71950296-71960295 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178168 5267 Panicoideae View MSA
124580875 5269 Grass View MSA
122049542 5273 Angiosperm View MSA
121347970 5274 Embryophyte View MSA
123380694 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.205        
cufflinks 0.045       Low
cufflinks 0.008     Low Low
cufflinks 0.047     Low Low
cufflinks 2.052       High
cufflinks 0.108        
cufflinks 2.954       High
cufflinks 0.56        
cufflinks 0.047     Low Low
cufflinks 0.185        
cufflinks 0.199        
cufflinks 0.105     Low  
cufflinks 0.23        
cufflinks 0.266        
cufflinks 0.846        
cufflinks 0.022     Low Low
cufflinks 2.701       High
cufflinks 3.029       High
cufflinks 0.083     Low  
cufflinks 2.189       High
cufflinks 2.927       High
cufflinks 0.198        
cufflinks 0.127        
cufflinks 0.142        
cufflinks 0.19        
cufflinks 0.187        
cufflinks 0.051     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.25       High
cufflinks 2.458       High

0 Strain