Gene : Sobic.001G436900 S. bicolor v3.1.1
Defline:  (1 of 2) K17907 - autophagy-related protein 9 (ATG9) Genomic Order:  4582
Name:  ? Sobic.001G436900 Secondary Identifier:  ? PAC:37938317
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G436900 0.5kb upstream 0.5kb upstream 7878 true Chr01: 71497689-71505566 Sorghum bicolor
Sobic.001G436900 0.5kb upstream 0.5kb upstream 500 false Chr01: 71497689-71498188 Sorghum bicolor
Sobic.001G436900 0.5kb downstream 0.5kb downstream 7878 true Chr01: 71498189-71506066 Sorghum bicolor
Sobic.001G436900 0.5kb downstream 0.5kb downstream 500 false Chr01: 71505567-71506066 Sorghum bicolor
Sobic.001G436900 1.0kb upstream 1.0kb upstream 8378 true Chr01: 71497189-71505566 Sorghum bicolor
Sobic.001G436900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 71497189-71498188 Sorghum bicolor
Sobic.001G436900 1.0kb downstream 1.0kb downstream 8378 true Chr01: 71498189-71506566 Sorghum bicolor
Sobic.001G436900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 71505567-71506566 Sorghum bicolor
Sobic.001G436900 2.0kb upstream 2.0kb upstream 9378 true Chr01: 71496189-71505566 Sorghum bicolor
Sobic.001G436900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 71496189-71498188 Sorghum bicolor
Sobic.001G436900 2.0kb downstream 2.0kb downstream 9378 true Chr01: 71498189-71507566 Sorghum bicolor
Sobic.001G436900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 71505567-71507566 Sorghum bicolor
Sobic.001G436900 5.0kb upstream 5.0kb upstream 12378 true Chr01: 71493189-71505566 Sorghum bicolor
Sobic.001G436900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 71493189-71498188 Sorghum bicolor
Sobic.001G436900 5.0kb downstream 5.0kb downstream 12378 true Chr01: 71498189-71510566 Sorghum bicolor
Sobic.001G436900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 71505567-71510566 Sorghum bicolor
Sobic.001G436900 10.0kb upstream 10.0kb upstream 17378 true Chr01: 71488189-71505566 Sorghum bicolor
Sobic.001G436900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 71488189-71498188 Sorghum bicolor
Sobic.001G436900 10.0kb downstream 10.0kb downstream 17378 true Chr01: 71498189-71515566 Sorghum bicolor
Sobic.001G436900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 71505567-71515566 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183668 5267 Panicoideae View MSA
124570948 5269 Grass View MSA
122044754 5273 Angiosperm View MSA
121345191 5274 Embryophyte View MSA
123424941 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.679       Low
cufflinks 8.353     High  
cufflinks 6.912        
cufflinks 7.338        
cufflinks 4.146       Low
cufflinks 6.549        
cufflinks 10.657       High
cufflinks 10.057     High  
cufflinks 7.863        
cufflinks 10.188       High
cufflinks 12.192     High High
cufflinks 10.994       High
cufflinks 8.533        
cufflinks 6.842        
cufflinks 6.53        
cufflinks 5.122        
cufflinks 12.249     High High
cufflinks 10.961       High
cufflinks 6.63        
cufflinks 7.27        
cufflinks 3.549       Low
cufflinks 5.428        
cufflinks 11.927     High High
cufflinks 9.473        
cufflinks 11.733     High High
cufflinks 8.817     High  
cufflinks 9.594        
cufflinks 5.983        
cufflinks 7.291        
cufflinks 6.489        

0 Strain