Gene : Sobic.005G227050 S. bicolor v3.1.1
Genomic Order:  2383 Name:  ? Sobic.005G227050
Secondary Identifier:  ? PAC:37925498
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G227050 0.5kb upstream 0.5kb upstream 4947 true Chr05: 71403991-71408937 Sorghum bicolor
Sobic.005G227050 0.5kb upstream 0.5kb upstream 500 false Chr05: 71408438-71408937 Sorghum bicolor
Sobic.005G227050 0.5kb downstream 0.5kb downstream 4947 true Chr05: 71403491-71408437 Sorghum bicolor
Sobic.005G227050 0.5kb downstream 0.5kb downstream 500 false Chr05: 71403491-71403990 Sorghum bicolor
Sobic.005G227050 1.0kb upstream 1.0kb upstream 5447 true Chr05: 71403991-71409437 Sorghum bicolor
Sobic.005G227050 1.0kb upstream 1.0kb upstream 1000 false Chr05: 71408438-71409437 Sorghum bicolor
Sobic.005G227050 1.0kb downstream 1.0kb downstream 5447 true Chr05: 71402991-71408437 Sorghum bicolor
Sobic.005G227050 1.0kb downstream 1.0kb downstream 1000 false Chr05: 71402991-71403990 Sorghum bicolor
Sobic.005G227050 2.0kb upstream 2.0kb upstream 6447 true Chr05: 71403991-71410437 Sorghum bicolor
Sobic.005G227050 2.0kb upstream 2.0kb upstream 2000 false Chr05: 71408438-71410437 Sorghum bicolor
Sobic.005G227050 2.0kb downstream 2.0kb downstream 6447 true Chr05: 71401991-71408437 Sorghum bicolor
Sobic.005G227050 2.0kb downstream 2.0kb downstream 2000 false Chr05: 71401991-71403990 Sorghum bicolor
Sobic.005G227050 5.0kb upstream 5.0kb upstream 9447 true Chr05: 71403991-71413437 Sorghum bicolor
Sobic.005G227050 5.0kb upstream 5.0kb upstream 5000 false Chr05: 71408438-71413437 Sorghum bicolor
Sobic.005G227050 5.0kb downstream 5.0kb downstream 9447 true Chr05: 71398991-71408437 Sorghum bicolor
Sobic.005G227050 5.0kb downstream 5.0kb downstream 5000 false Chr05: 71398991-71403990 Sorghum bicolor
Sobic.005G227050 10.0kb upstream 10.0kb upstream 14447 true Chr05: 71403991-71418437 Sorghum bicolor
Sobic.005G227050 10.0kb upstream 10.0kb upstream 10000 false Chr05: 71408438-71418437 Sorghum bicolor
Sobic.005G227050 10.0kb downstream 10.0kb downstream 14447 true Chr05: 71393991-71408437 Sorghum bicolor
Sobic.005G227050 10.0kb downstream 10.0kb downstream 10000 false Chr05: 71393991-71403990 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994917 5273 Angiosperm View MSA
122198763 5267 Panicoideae View MSA
124586142 5269 Grass View MSA
121265126 5274 Embryophyte View MSA
123303531 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.018     Low  
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.433        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.981       High
cufflinks 1.318       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.119        
cufflinks 0.175        
cufflinks 0.026     Low  
cufflinks 0.119        
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.799       High
cufflinks 2.615       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.284       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.153        
cufflinks 0.142        
cufflinks 0.01     Low Low
cufflinks 0.02     Low  
cufflinks 0.029     Low  
cufflinks 0.02     Low  
cufflinks 2.619       High
cufflinks 0.003     Low Low

0 Strain