Gene : Sobic.005G232000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR21660//PTHR21660:SF8 - THIOESTERASE SUPERFAMILY MEMBER-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2434
Name:  ? Sobic.005G232000 Secondary Identifier:  ? PAC:37923433
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-1121 Sorghum bicolor pathologic  
Sbicolor PWY-321 Sorghum bicolor pathologic  
Sbicolor PWY-5148 Sorghum bicolor pathologic  
Sbicolor PWY-6733 Sorghum bicolor pathologic  
Sbicolor PWY-735 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G232000 0.5kb upstream 0.5kb upstream 1037 true Chr05: 71825344-71826380 Sorghum bicolor
Sobic.005G232000 0.5kb upstream 0.5kb upstream 500 false Chr05: 71825881-71826380 Sorghum bicolor
Sobic.005G232000 0.5kb downstream 0.5kb downstream 1037 true Chr05: 71824844-71825880 Sorghum bicolor
Sobic.005G232000 0.5kb downstream 0.5kb downstream 500 false Chr05: 71824844-71825343 Sorghum bicolor
Sobic.005G232000 1.0kb upstream 1.0kb upstream 1537 true Chr05: 71825344-71826880 Sorghum bicolor
Sobic.005G232000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 71825881-71826880 Sorghum bicolor
Sobic.005G232000 1.0kb downstream 1.0kb downstream 1537 true Chr05: 71824344-71825880 Sorghum bicolor
Sobic.005G232000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 71824344-71825343 Sorghum bicolor
Sobic.005G232000 2.0kb upstream 2.0kb upstream 2537 true Chr05: 71825344-71827880 Sorghum bicolor
Sobic.005G232000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 71825881-71827880 Sorghum bicolor
Sobic.005G232000 2.0kb downstream 2.0kb downstream 2537 true Chr05: 71823344-71825880 Sorghum bicolor
Sobic.005G232000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 71823344-71825343 Sorghum bicolor
Sobic.005G232000 5.0kb upstream 5.0kb upstream 5537 true Chr05: 71825344-71830880 Sorghum bicolor
Sobic.005G232000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 71825881-71830880 Sorghum bicolor
Sobic.005G232000 5.0kb downstream 5.0kb downstream 5537 true Chr05: 71820344-71825880 Sorghum bicolor
Sobic.005G232000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 71820344-71825343 Sorghum bicolor
Sobic.005G232000 10.0kb upstream 10.0kb upstream 10537 true Chr05: 71825344-71835880 Sorghum bicolor
Sobic.005G232000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 71825881-71835880 Sorghum bicolor
Sobic.005G232000 10.0kb downstream 10.0kb downstream 10537 true Chr05: 71815344-71825880 Sorghum bicolor
Sobic.005G232000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 71815344-71825343 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182900 5267 Panicoideae View MSA
124575112 5269 Grass View MSA
122042394 5273 Angiosperm View MSA
121309957 5274 Embryophyte View MSA
123428627 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.431       High
cufflinks 3.483        
cufflinks 4.435        
cufflinks 8.339       High
cufflinks 3.538        
cufflinks 12.673       High
cufflinks 4.594        
cufflinks 3.419        
cufflinks 6.108        
cufflinks 5.417        
cufflinks 4.209        
cufflinks 4.341        
cufflinks 2.858        
cufflinks 3.925        
cufflinks 4.131        
cufflinks 6.346        
cufflinks 3.511        
cufflinks 2.87        
cufflinks 4.728        
cufflinks 3.994        
cufflinks 2.632        
cufflinks 4.666        
cufflinks 2.579        
cufflinks 2.031       Low
cufflinks 4.292        
cufflinks 2.636        
cufflinks 2.692        
cufflinks 17.242     High High
cufflinks 2.819        
cufflinks 5.164        

0 Strain