Gene : Sobic.001G515500 S. bicolor v3.1.1
Defline:  (1 of 2) K13473 - chitin elicitor-binding protein (CEBIP) Genomic Order:  5422
Name:  ? Sobic.001G515500 Secondary Identifier:  ? PAC:37944194
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G515500 0.5kb upstream 0.5kb upstream 2551 true Chr01: 78240467-78243017 Sorghum bicolor
Sobic.001G515500 0.5kb upstream 0.5kb upstream 500 false Chr01: 78242518-78243017 Sorghum bicolor
Sobic.001G515500 0.5kb downstream 0.5kb downstream 2551 true Chr01: 78239967-78242517 Sorghum bicolor
Sobic.001G515500 0.5kb downstream 0.5kb downstream 500 false Chr01: 78239967-78240466 Sorghum bicolor
Sobic.001G515500 1.0kb upstream 1.0kb upstream 3051 true Chr01: 78240467-78243517 Sorghum bicolor
Sobic.001G515500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 78242518-78243517 Sorghum bicolor
Sobic.001G515500 1.0kb downstream 1.0kb downstream 3051 true Chr01: 78239467-78242517 Sorghum bicolor
Sobic.001G515500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 78239467-78240466 Sorghum bicolor
Sobic.001G515500 2.0kb upstream 2.0kb upstream 4051 true Chr01: 78240467-78244517 Sorghum bicolor
Sobic.001G515500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 78242518-78244517 Sorghum bicolor
Sobic.001G515500 2.0kb downstream 2.0kb downstream 4051 true Chr01: 78238467-78242517 Sorghum bicolor
Sobic.001G515500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 78238467-78240466 Sorghum bicolor
Sobic.001G515500 5.0kb upstream 5.0kb upstream 7051 true Chr01: 78240467-78247517 Sorghum bicolor
Sobic.001G515500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 78242518-78247517 Sorghum bicolor
Sobic.001G515500 5.0kb downstream 5.0kb downstream 7051 true Chr01: 78235467-78242517 Sorghum bicolor
Sobic.001G515500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 78235467-78240466 Sorghum bicolor
Sobic.001G515500 10.0kb upstream 10.0kb upstream 12051 true Chr01: 78240467-78252517 Sorghum bicolor
Sobic.001G515500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 78242518-78252517 Sorghum bicolor
Sobic.001G515500 10.0kb downstream 10.0kb downstream 12051 true Chr01: 78230467-78242517 Sorghum bicolor
Sobic.001G515500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 78230467-78240466 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041196 5273 Angiosperm View MSA
122176454 5267 Panicoideae View MSA
124574991 5269 Grass View MSA
121350262 5274 Embryophyte View MSA
123381651 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.906        
cufflinks 9.889     High  
cufflinks 32.909     High High
cufflinks 32.421     High High
cufflinks 14.659     High  
cufflinks 31.722     High High
cufflinks 0.865       Low
cufflinks 6.645        
cufflinks 7.185        
cufflinks 4.44        
cufflinks 14.427     High  
cufflinks 2.213        
cufflinks 9.139        
cufflinks 2.744        
cufflinks 11.804        
cufflinks 27.243     High High
cufflinks 0.613       Low
cufflinks 0.347       Low
cufflinks 46.381     High High
cufflinks 0.626       Low
cufflinks 0.993       Low
cufflinks 3.664        
cufflinks 1.512       Low
cufflinks 1.831        
cufflinks 31.671     High High
cufflinks 21.47     High  
cufflinks 16.149     High  
cufflinks 0.759       Low
cufflinks 2.114        
cufflinks 6.274        

0 Strain