Gene : Sobic.001G507200 S. bicolor v3.1.1
Defline:  (1 of 1) K05749 - cytoplasmic FMR1 interacting protein (CYFIP) Genomic Order:  5331
Name:  ? Sobic.001G507200 Secondary Identifier:  ? PAC:37941352
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G507200 0.5kb upstream 0.5kb upstream 21047 true Chr01: 77490609-77511655 Sorghum bicolor
Sobic.001G507200 0.5kb upstream 0.5kb upstream 500 false Chr01: 77511156-77511655 Sorghum bicolor
Sobic.001G507200 0.5kb downstream 0.5kb downstream 21047 true Chr01: 77490109-77511155 Sorghum bicolor
Sobic.001G507200 0.5kb downstream 0.5kb downstream 500 false Chr01: 77490109-77490608 Sorghum bicolor
Sobic.001G507200 1.0kb upstream 1.0kb upstream 21547 true Chr01: 77490609-77512155 Sorghum bicolor
Sobic.001G507200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 77511156-77512155 Sorghum bicolor
Sobic.001G507200 1.0kb downstream 1.0kb downstream 21547 true Chr01: 77489609-77511155 Sorghum bicolor
Sobic.001G507200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 77489609-77490608 Sorghum bicolor
Sobic.001G507200 2.0kb upstream 2.0kb upstream 22547 true Chr01: 77490609-77513155 Sorghum bicolor
Sobic.001G507200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 77511156-77513155 Sorghum bicolor
Sobic.001G507200 2.0kb downstream 2.0kb downstream 22547 true Chr01: 77488609-77511155 Sorghum bicolor
Sobic.001G507200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 77488609-77490608 Sorghum bicolor
Sobic.001G507200 5.0kb upstream 5.0kb upstream 25547 true Chr01: 77490609-77516155 Sorghum bicolor
Sobic.001G507200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 77511156-77516155 Sorghum bicolor
Sobic.001G507200 5.0kb downstream 5.0kb downstream 25547 true Chr01: 77485609-77511155 Sorghum bicolor
Sobic.001G507200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 77485609-77490608 Sorghum bicolor
Sobic.001G507200 10.0kb upstream 10.0kb upstream 30547 true Chr01: 77490609-77521155 Sorghum bicolor
Sobic.001G507200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 77511156-77521155 Sorghum bicolor
Sobic.001G507200 10.0kb downstream 10.0kb downstream 30547 true Chr01: 77480609-77511155 Sorghum bicolor
Sobic.001G507200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 77480609-77490608 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047332 5273 Angiosperm View MSA
122190888 5267 Panicoideae View MSA
124571912 5269 Grass View MSA
121351207 5274 Embryophyte View MSA
123426816 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.769       Low
cufflinks 0.388       Low
cufflinks 0.746       Low
cufflinks 0.898       Low
cufflinks 7.074       High
cufflinks 1.364        
cufflinks 4.233        
cufflinks 1.686        
cufflinks 3.911        
cufflinks 4.338        
cufflinks 5.345        
cufflinks 4.493        
cufflinks 4.161        
cufflinks 4.682        
cufflinks 2.937        
cufflinks 0.598       Low
cufflinks 4.046        
cufflinks 4.469        
cufflinks 1.04       Low
cufflinks 4.109        
cufflinks 6.982       High
cufflinks 4.68        
cufflinks 4.815        
cufflinks 4.667        
cufflinks 0.595       Low
cufflinks 0.564       Low
cufflinks 4.07        
cufflinks 0.372       Low
cufflinks 5.071        
cufflinks 4.297        

0 Strain