Gene : Sobic.001G495200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22912:SF135 - GLUTATHIONE REDUCTASE, CHLOROPLASTIC Genomic Order:  5201
Name:  ? Sobic.001G495200 Secondary Identifier:  ? PAC:37940331
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor GLUT-REDOX-PWY Sorghum bicolor pathologic  
Sbicolor PWY-4081 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G495200 0.5kb upstream 0.5kb upstream 5253 true Chr01: 76463309-76468561 Sorghum bicolor
Sobic.001G495200 0.5kb upstream 0.5kb upstream 500 false Chr01: 76468062-76468561 Sorghum bicolor
Sobic.001G495200 0.5kb downstream 0.5kb downstream 5253 true Chr01: 76462809-76468061 Sorghum bicolor
Sobic.001G495200 0.5kb downstream 0.5kb downstream 500 false Chr01: 76462809-76463308 Sorghum bicolor
Sobic.001G495200 1.0kb upstream 1.0kb upstream 5753 true Chr01: 76463309-76469061 Sorghum bicolor
Sobic.001G495200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 76468062-76469061 Sorghum bicolor
Sobic.001G495200 1.0kb downstream 1.0kb downstream 5753 true Chr01: 76462309-76468061 Sorghum bicolor
Sobic.001G495200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 76462309-76463308 Sorghum bicolor
Sobic.001G495200 2.0kb upstream 2.0kb upstream 6753 true Chr01: 76463309-76470061 Sorghum bicolor
Sobic.001G495200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 76468062-76470061 Sorghum bicolor
Sobic.001G495200 2.0kb downstream 2.0kb downstream 6753 true Chr01: 76461309-76468061 Sorghum bicolor
Sobic.001G495200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 76461309-76463308 Sorghum bicolor
Sobic.001G495200 5.0kb upstream 5.0kb upstream 9753 true Chr01: 76463309-76473061 Sorghum bicolor
Sobic.001G495200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 76468062-76473061 Sorghum bicolor
Sobic.001G495200 5.0kb downstream 5.0kb downstream 9753 true Chr01: 76458309-76468061 Sorghum bicolor
Sobic.001G495200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 76458309-76463308 Sorghum bicolor
Sobic.001G495200 10.0kb upstream 10.0kb upstream 14753 true Chr01: 76463309-76478061 Sorghum bicolor
Sobic.001G495200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 76468062-76478061 Sorghum bicolor
Sobic.001G495200 10.0kb downstream 10.0kb downstream 14753 true Chr01: 76453309-76468061 Sorghum bicolor
Sobic.001G495200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 76453309-76463308 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192622 5267 Panicoideae View MSA
124587525 5269 Grass View MSA
122045243 5273 Angiosperm View MSA
121344387 5274 Embryophyte View MSA
123424685 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.523       Low
cufflinks 11.628     High  
cufflinks 18.129     High High
cufflinks 15.608     High  
cufflinks 9.401        
cufflinks 16.557     High High
cufflinks 16.042     High  
cufflinks 16.091     High  
cufflinks 12.948     High  
cufflinks 13.86     High  
cufflinks 5.128       Low
cufflinks 5.79       Low
cufflinks 10.379        
cufflinks 6.112       Low
cufflinks 10.806        
cufflinks 10.761     High  
cufflinks 16.313     High High
cufflinks 19.484     High High
cufflinks 12.045     High  
cufflinks 12.975     High  
cufflinks 10.737        
cufflinks 8.309        
cufflinks 7.335       Low
cufflinks 7.033       Low
cufflinks 10.525     High  
cufflinks 11.069     High  
cufflinks 7.047       Low
cufflinks 12.956     High  
cufflinks 37.125     High High
cufflinks 11.817        

0 Strain