Gene : Sobic.001G489700 S. bicolor v3.1.1
Defline:  (1 of 1) K02257 - protoheme IX farnesyltransferase (COX10) Genomic Order:  5138
Name:  ? Sobic.001G489700 Secondary Identifier:  ? PAC:37945322
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G489700 0.5kb upstream 0.5kb upstream 6576 true Chr01: 75985275-75991850 Sorghum bicolor
Sobic.001G489700 0.5kb upstream 0.5kb upstream 500 false Chr01: 75985275-75985774 Sorghum bicolor
Sobic.001G489700 0.5kb downstream 0.5kb downstream 6576 true Chr01: 75985775-75992350 Sorghum bicolor
Sobic.001G489700 0.5kb downstream 0.5kb downstream 500 false Chr01: 75991851-75992350 Sorghum bicolor
Sobic.001G489700 1.0kb upstream 1.0kb upstream 7076 true Chr01: 75984775-75991850 Sorghum bicolor
Sobic.001G489700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 75984775-75985774 Sorghum bicolor
Sobic.001G489700 1.0kb downstream 1.0kb downstream 7076 true Chr01: 75985775-75992850 Sorghum bicolor
Sobic.001G489700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 75991851-75992850 Sorghum bicolor
Sobic.001G489700 2.0kb upstream 2.0kb upstream 8076 true Chr01: 75983775-75991850 Sorghum bicolor
Sobic.001G489700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 75983775-75985774 Sorghum bicolor
Sobic.001G489700 2.0kb downstream 2.0kb downstream 8076 true Chr01: 75985775-75993850 Sorghum bicolor
Sobic.001G489700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 75991851-75993850 Sorghum bicolor
Sobic.001G489700 5.0kb upstream 5.0kb upstream 11076 true Chr01: 75980775-75991850 Sorghum bicolor
Sobic.001G489700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 75980775-75985774 Sorghum bicolor
Sobic.001G489700 5.0kb downstream 5.0kb downstream 11076 true Chr01: 75985775-75996850 Sorghum bicolor
Sobic.001G489700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 75991851-75996850 Sorghum bicolor
Sobic.001G489700 10.0kb upstream 10.0kb upstream 16076 true Chr01: 75975775-75991850 Sorghum bicolor
Sobic.001G489700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 75975775-75985774 Sorghum bicolor
Sobic.001G489700 10.0kb downstream 10.0kb downstream 16076 true Chr01: 75985775-76001850 Sorghum bicolor
Sobic.001G489700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 75991851-76001850 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184638 5267 Panicoideae View MSA
124575772 5269 Grass View MSA
122046986 5273 Angiosperm View MSA
121346504 5274 Embryophyte View MSA
123428600 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.836        
cufflinks 3.574       Low
cufflinks 4.873        
cufflinks 4.753        
cufflinks 4.9        
cufflinks 6.147        
cufflinks 5.477        
cufflinks 4.753        
cufflinks 5.619        
cufflinks 6.893        
cufflinks 8.108        
cufflinks 8.335        
cufflinks 6.04        
cufflinks 9.93       High
cufflinks 6.642        
cufflinks 4.889        
cufflinks 5.752        
cufflinks 6.292        
cufflinks 5.028        
cufflinks 6.645        
cufflinks 5.185        
cufflinks 10.394       High
cufflinks 9.506       High
cufflinks 9.43       High
cufflinks 4.156       Low
cufflinks 3.908       Low
cufflinks 6.84        
cufflinks 3.293       Low
cufflinks 7.212        
cufflinks 6.088        

0 Strain