Gene : Sobic.005G183700 S. bicolor v3.1.1
Defline:  (1 of 4) 2.3.1.64 - Agmatine N(4)-coumaroyltransferase / p-coumaroyl-CoA-agmatine N-p-coumaroyltransferase Genomic Order:  1935
Name:  ? Sobic.005G183700 Secondary Identifier:  ? PAC:37924452
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G183700 0.5kb upstream 0.5kb upstream 1934 true Chr05: 66875789-66877722 Sorghum bicolor
Sobic.005G183700 0.5kb upstream 0.5kb upstream 500 false Chr05: 66875789-66876288 Sorghum bicolor
Sobic.005G183700 0.5kb downstream 0.5kb downstream 1934 true Chr05: 66876289-66878222 Sorghum bicolor
Sobic.005G183700 0.5kb downstream 0.5kb downstream 500 false Chr05: 66877723-66878222 Sorghum bicolor
Sobic.005G183700 1.0kb upstream 1.0kb upstream 2434 true Chr05: 66875289-66877722 Sorghum bicolor
Sobic.005G183700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 66875289-66876288 Sorghum bicolor
Sobic.005G183700 1.0kb downstream 1.0kb downstream 2434 true Chr05: 66876289-66878722 Sorghum bicolor
Sobic.005G183700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 66877723-66878722 Sorghum bicolor
Sobic.005G183700 2.0kb upstream 2.0kb upstream 3434 true Chr05: 66874289-66877722 Sorghum bicolor
Sobic.005G183700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 66874289-66876288 Sorghum bicolor
Sobic.005G183700 2.0kb downstream 2.0kb downstream 3434 true Chr05: 66876289-66879722 Sorghum bicolor
Sobic.005G183700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 66877723-66879722 Sorghum bicolor
Sobic.005G183700 5.0kb upstream 5.0kb upstream 6434 true Chr05: 66871289-66877722 Sorghum bicolor
Sobic.005G183700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 66871289-66876288 Sorghum bicolor
Sobic.005G183700 5.0kb downstream 5.0kb downstream 6434 true Chr05: 66876289-66882722 Sorghum bicolor
Sobic.005G183700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 66877723-66882722 Sorghum bicolor
Sobic.005G183700 10.0kb upstream 10.0kb upstream 11434 true Chr05: 66866289-66877722 Sorghum bicolor
Sobic.005G183700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 66866289-66876288 Sorghum bicolor
Sobic.005G183700 10.0kb downstream 10.0kb downstream 11434 true Chr05: 66876289-66887722 Sorghum bicolor
Sobic.005G183700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 66877723-66887722 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194408 5267 Panicoideae View MSA
124586548 5269 Grass View MSA
122051149 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.056     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.13       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.082     Low  
cufflinks 0.128       High
cufflinks 0.116       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  

0 Strain