Gene : Sobic.002G066800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA Genomic Order:  687
Name:  ? Sobic.002G066800 Secondary Identifier:  ? PAC:37954930
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G066800 0.5kb upstream 0.5kb upstream 15156 true Chr02: 6601098-6616253 Sorghum bicolor
Sobic.002G066800 0.5kb upstream 0.5kb upstream 500 false Chr02: 6601098-6601597 Sorghum bicolor
Sobic.002G066800 0.5kb downstream 0.5kb downstream 15156 true Chr02: 6601598-6616753 Sorghum bicolor
Sobic.002G066800 0.5kb downstream 0.5kb downstream 500 false Chr02: 6616254-6616753 Sorghum bicolor
Sobic.002G066800 1.0kb upstream 1.0kb upstream 15656 true Chr02: 6600598-6616253 Sorghum bicolor
Sobic.002G066800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6600598-6601597 Sorghum bicolor
Sobic.002G066800 1.0kb downstream 1.0kb downstream 15656 true Chr02: 6601598-6617253 Sorghum bicolor
Sobic.002G066800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6616254-6617253 Sorghum bicolor
Sobic.002G066800 2.0kb upstream 2.0kb upstream 16656 true Chr02: 6599598-6616253 Sorghum bicolor
Sobic.002G066800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6599598-6601597 Sorghum bicolor
Sobic.002G066800 2.0kb downstream 2.0kb downstream 16656 true Chr02: 6601598-6618253 Sorghum bicolor
Sobic.002G066800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6616254-6618253 Sorghum bicolor
Sobic.002G066800 5.0kb upstream 5.0kb upstream 19656 true Chr02: 6596598-6616253 Sorghum bicolor
Sobic.002G066800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6596598-6601597 Sorghum bicolor
Sobic.002G066800 5.0kb downstream 5.0kb downstream 19656 true Chr02: 6601598-6621253 Sorghum bicolor
Sobic.002G066800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6616254-6621253 Sorghum bicolor
Sobic.002G066800 10.0kb upstream 10.0kb upstream 24656 true Chr02: 6591598-6616253 Sorghum bicolor
Sobic.002G066800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6591598-6601597 Sorghum bicolor
Sobic.002G066800 10.0kb downstream 10.0kb downstream 24656 true Chr02: 6601598-6626253 Sorghum bicolor
Sobic.002G066800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6616254-6626253 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189840 5267 Panicoideae View MSA
124570106 5269 Grass View MSA
122047135 5273 Angiosperm View MSA
121347287 5274 Embryophyte View MSA
123428083 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.781        
cufflinks 0.13       Low
cufflinks 0.37       Low
cufflinks 0.528        
cufflinks 2.488       High
cufflinks 0.566        
cufflinks 0.737        
cufflinks 0.271       Low
cufflinks 1.583        
cufflinks 1.789        
cufflinks 1.097        
cufflinks 1.115        
cufflinks 1.101        
cufflinks 1.046        
cufflinks 1.136        
cufflinks 0.279       Low
cufflinks 0.708        
cufflinks 0.679        
cufflinks 0.41        
cufflinks 0.745        
cufflinks 3.132       High
cufflinks 1.268        
cufflinks 1.093        
cufflinks 1.158        
cufflinks 0.28       Low
cufflinks 0.137       Low
cufflinks 1.359        
cufflinks 1.016        
cufflinks 0.648        
cufflinks 1.911       High

0 Strain