Protein Family : RNAligase 122047135

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  63

63 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30111.t000012 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA R. communis v0.1 18157   30111: 81539-99695
30111.t000028 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA R. communis v0.1 20396   30111: 195778-216173
orange1.1g046016m.g (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA C. sinensis v1.1 19875   scaffold00014: 1298902-1318776
AT1G07910 (1 of 1) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase A. thaliana TAIR10 RNL 9176   Chr1: 2445470-2454645
Thhalv10006605m.g (1 of 1) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase E. salsugineum v1.0 8788   scaffold_5: 13136002-13144789
Ciclev10027702m.g (1 of 1) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase C. clementina v1.0 20573   scaffold_8: 22380131-22400703
Lus10037788.g (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA L. usitatissimum v1.0 9067   scaffold196: 1579598-1588664
Lus10017071.g (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA L. usitatissimum v1.0 9062   scaffold216: 59156-68217
Gorai.009G078900 (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA G. raimondii v2.1 15933   Chr09: 5692389-5708321
Thecc1EG041088 (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA T. cacao v1.1 19899   scaffold_9: 35398947-35418845
Migut.D02182 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA M. guttatus v2.0 13444   scaffold_4: 18428608-18442051
Migut.N02091 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA M. guttatus v2.0 11456   scaffold_14: 18444914-18456369
Cagra.1671s0411 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA C. grandiflora v1.1 11828   Scaffold1671: 1474841-1486668
Glyma.U020600 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA G. max Wm82.a2.v1 22864   scaffold_21: 3353318-3376181
Brara.I05332 (1 of 2) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase B. rapa FPsc v1.3 7206   A09: 43395120-43402325
Bostr.25219s0155 (1 of 1) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase B. stricta v1.2 8413   Scaffold25219: 761601-770013
Medtr4g060795 (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA M. truncatula Mt4.0v1 19721   chr4: 22371212-22390932
SapurV1A.0837s0040 (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA S. purpurea v1.0 25352   Scaffold0837: 29557-54908
evm_27.TU.AmTr_v1.0_scaffold00080.64 (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA A. trichopoda v1.0 134457   AmTr_v1.0_scaffold00080: 2035687-2170143
Traes_2BS_8559BD0B6 (1 of 3) PF08302 - Fungal tRNA ligase phosphodiesterase domain (tRNA_lig_CPD) T. aestivum v2.2 11963   ta_iwgsc_2bs_v1_5212053: 1071-13033
Traes_2DS_AD74205D8 (1 of 3) PF08302 - Fungal tRNA ligase phosphodiesterase domain (tRNA_lig_CPD) T. aestivum v2.2 11908   ta_iwgsc_2ds_v1_5345942: 865-12772
Eucgr.B02467 (1 of 1) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase E. grandis v2.0 21559   Chr02: 44739812-44761370
Prupe.6G094700 (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA P. persica v2.1 16511   Pp06: 6576858-6593368
Manes.11G141000 (1 of 1) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase M. esculenta v6.1 20487   Chromosome11: 25356586-25377072
Kalax.0055s0132 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA K. laxiflora v1.1 11146   scaffold_55: 955632-966777
Kalax.0817s0016 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA K. laxiflora v1.1 11230   scaffold_817: 119717-130946
Seita.2G069700 (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA S. italica v2.2 11040   scaffold_2: 5789149-5800188
Bradi1g54807 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA B. distachyon v3.1 13412   Bd1: 53348344-53361755
Aco017458 (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA A. comosus v3 24442   LG09: 3927876-3952317
Aqcoe3G280900 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA A. coerulea v3.1 3537   Chr_03: 32659839-32663375

63 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30111.m000725 R. communis v0.1 122047135 RNAligase 2 5273 Angiosperm
Lus10037788 L. usitatissimum v1.0 122047135 RNAligase 2 5273 Angiosperm
Lus10017071 L. usitatissimum v1.0 122047135 RNAligase 2 5273 Angiosperm
Glyma.U020600.1.p G. max Wm82.a2.v1 122047135 RNAligase 1 5273 Angiosperm
Brara.I05332.1.p B. rapa FPsc v1.3 122047135 RNAligase 1 5273 Angiosperm
Medtr4g060795.1 M. truncatula Mt4.0v1 122047135 RNAligase 1 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00080.64 A. trichopoda v1.0 122047135 RNAligase 1 5273 Angiosperm
Traes_2DS_AD74205D8.2 T. aestivum v2.2 122047135 RNAligase 2 5273 Angiosperm
Traes_2BS_8559BD0B6.3 T. aestivum v2.2 122047135 RNAligase 2 5273 Angiosperm
Eucgr.B02467.1.p E. grandis v2.0 122047135 RNAligase 1 5273 Angiosperm
Kalax.0055s0132.1.p K. laxiflora v1.1 122047135 RNAligase 2 5273 Angiosperm
Seita.2G069700.1.p S. italica v2.2 122047135 RNAligase 1 5273 Angiosperm
Bradi1g54807.1.p B. distachyon v3.1 122047135 RNAligase 1 5273 Angiosperm
Brast06G195200.1.p B. stacei v1.1 122047135 RNAligase 1 5273 Angiosperm
Aco017458.1 A. comosus v3 122047135 RNAligase 1 5273 Angiosperm
Aqcoe1G491200.1.p A. coerulea v3.1 122047135 RNAligase 2 5273 Angiosperm
Aqcoe3G280900.1.p A. coerulea v3.1 122047135 RNAligase 2 5273 Angiosperm
LOC_Os07g09400.1 O. sativa v7.0 122047135 RNAligase 1 5273 Angiosperm
Zosma48g00730.1 Z. marina v2.2 122047135 RNAligase 1 5273 Angiosperm
Tp57577_TGAC_v2_mRNA15409 T. pratense v2 122047135 RNAligase 1 5273 Angiosperm
DCAR_006042 D. carota v2.0 122047135 RNAligase 1 5273 Angiosperm
AUR62006513-RA C. quinoa v1.0 122047135 RNAligase 2 5273 Angiosperm
AUR62025015-RA C. quinoa v1.0 122047135 RNAligase 2 5273 Angiosperm
Phvul.011G072500.1.p P. vulgaris v2.1 122047135 RNAligase 1 5273 Angiosperm
Potri.016G083100.6.p P. trichocarpa v3.1 122047135 RNAligase 1 5273 Angiosperm
Podel.16G086600.1.p P. deltoides WV94 v2.1 122047135 RNAligase 1 5273 Angiosperm
Pavir.2NG072200.1.p P. virgatum v4.1 122047135 RNAligase 1 5273 Angiosperm
Sobic.002G066800.1.p S. bicolor v3.1.1 122047135 RNAligase 1 5273 Angiosperm
VIT_206s0004g03300.1 V. vinifera v2.1 122047135 RNAligase 1 5273 Angiosperm
HORVU2Hr1G024610.13 H. vulgare r1 122047135 RNAligase 1 5273 Angiosperm