Gene : Cagra.1671s0411 C. grandiflora v1.1
Defline:  (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA Genomic Order:  411
Name:  ? Cagra.1671s0411 Secondary Identifier:  ? PAC:28914218
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0411 0.5kb upstream 0.5kb upstream 12328 true Scaffold1671: 1474341-1486668 Capsella grandiflora
Cagra.1671s0411 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 1474341-1474840 Capsella grandiflora
Cagra.1671s0411 0.5kb downstream 0.5kb downstream 12328 true Scaffold1671: 1474841-1487168 Capsella grandiflora
Cagra.1671s0411 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 1486669-1487168 Capsella grandiflora
Cagra.1671s0411 1.0kb upstream 1.0kb upstream 12828 true Scaffold1671: 1473841-1486668 Capsella grandiflora
Cagra.1671s0411 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 1473841-1474840 Capsella grandiflora
Cagra.1671s0411 1.0kb downstream 1.0kb downstream 12416 true Scaffold1671: 1474841-1487256 Capsella grandiflora
Cagra.1671s0411 1.0kb downstream 1.0kb downstream 588 false Scaffold1671: 1486669-1487256 Capsella grandiflora
Cagra.1671s0411 2.0kb upstream 2.0kb upstream 13828 true Scaffold1671: 1472841-1486668 Capsella grandiflora
Cagra.1671s0411 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 1472841-1474840 Capsella grandiflora
Cagra.1671s0411 2.0kb downstream 2.0kb downstream 12416 true Scaffold1671: 1474841-1487256 Capsella grandiflora
Cagra.1671s0411 2.0kb downstream 2.0kb downstream 588 false Scaffold1671: 1486669-1487256 Capsella grandiflora
Cagra.1671s0411 5.0kb upstream 5.0kb upstream 16828 true Scaffold1671: 1469841-1486668 Capsella grandiflora
Cagra.1671s0411 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 1469841-1474840 Capsella grandiflora
Cagra.1671s0411 5.0kb downstream 5.0kb downstream 12416 true Scaffold1671: 1474841-1487256 Capsella grandiflora
Cagra.1671s0411 5.0kb downstream 5.0kb downstream 588 false Scaffold1671: 1486669-1487256 Capsella grandiflora
Cagra.1671s0411 10.0kb upstream 10.0kb upstream 21828 true Scaffold1671: 1464841-1486668 Capsella grandiflora
Cagra.1671s0411 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 1464841-1474840 Capsella grandiflora
Cagra.1671s0411 10.0kb downstream 10.0kb downstream 12416 true Scaffold1671: 1474841-1487256 Capsella grandiflora
Cagra.1671s0411 10.0kb downstream 10.0kb downstream 588 false Scaffold1671: 1486669-1487256 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332808 5261 Brassicaceae Singleton cluster - no MSA
123773836 5264 Brassicales-Malvales Singleton cluster - no MSA
124272300 5266 SBM Singleton cluster - no MSA
124249716 5268 Malvidae View MSA
124065775 5270 Rosid View MSA
123748568 5271 Pentapetalae View MSA
122793340 5272 Eudicot View MSA
122047135 5273 Angiosperm View MSA
121347287 5274 Embryophyte View MSA
123428083 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain