Protein Family : RNAligase 124249716

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  21
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21 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30111.t000012 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA R. communis v0.1 18157   30111: 81539-99695
30111.t000028 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA R. communis v0.1 20396   30111: 195778-216173
orange1.1g046016m.g (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA C. sinensis v1.1 19875   scaffold00014: 1298902-1318776
AT1G07910 (1 of 1) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase A. thaliana TAIR10 RNL 9176   Chr1: 2445470-2454645
Thhalv10006605m.g (1 of 1) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase E. salsugineum v1.0 8788   scaffold_5: 13136002-13144789
Ciclev10027702m.g (1 of 1) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase C. clementina v1.0 20573   scaffold_8: 22380131-22400703
Lus10037788.g (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA L. usitatissimum v1.0 9067   scaffold196: 1579598-1588664
Lus10017071.g (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA L. usitatissimum v1.0 9062   scaffold216: 59156-68217
Gorai.009G078900 (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA G. raimondii v2.1 15933   Chr09: 5692389-5708321
Thecc1EG041088 (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA T. cacao v1.1 19899   scaffold_9: 35398947-35418845
Cagra.1671s0411 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA C. grandiflora v1.1 11828   Scaffold1671: 1474841-1486668
Brara.I05332 (1 of 2) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase B. rapa FPsc v1.3 7206   A09: 43395120-43402325
Bostr.25219s0155 (1 of 1) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase B. stricta v1.2 8413   Scaffold25219: 761601-770013
SapurV1A.0837s0040 (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA S. purpurea v1.0 25352   Scaffold0837: 29557-54908
Manes.11G141000 (1 of 1) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase M. esculenta v6.1 20487   Chromosome11: 25356586-25377072
AL6G53580 (1 of 2) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase A. lyrata v2.1 8377   scaffold_6: 25102511-25110887
AL1G18200 (1 of 2) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase A. lyrata v2.1 8655   scaffold_1: 2921432-2930086
Potri.016G083100 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA P. trichocarpa v3.1 20784   Chr16: 6446103-6466886
Podel.16G086600 (1 of 1) PF08302 - Fungal tRNA ligase phosphodiesterase domain (tRNA_lig_CPD) P. deltoides WV94 v2.1 18296   Chr16: 6693873-6712168
Carub.0001s0725 (1 of 2) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase C. rubella v1.1 11695   scaffold_1: 2518895-2530589
Carub.0011s0009 (1 of 2) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase C. rubella v1.1 12015   scaffold_11: 198055-210069

21 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30111.m000725 R. communis v0.1 124249716 RNAligase 2 5268 Malvidae
Lus10037788 L. usitatissimum v1.0 124249716 RNAligase 2 5268 Malvidae
Lus10017071 L. usitatissimum v1.0 124249716 RNAligase 2 5268 Malvidae
SapurV1A.0837s0040.1.p S. purpurea v1.0 124249716 RNAligase 1 5268 Malvidae
Potri.016G083100.6.p P. trichocarpa v3.1 124249716 RNAligase 1 5268 Malvidae
Podel.16G086600.1.p P. deltoides WV94 v2.1 124249716 RNAligase 1 5268 Malvidae
Carub.0001s0725.1.p C. rubella v1.1 124249716 RNAligase 2 5268 Malvidae
30111.m000709 R. communis v0.1 124249716 RNAligase 2 5268 Malvidae
orange1.1g046016m C. sinensis v1.1 124249716 RNAligase 1 5268 Malvidae
AT1G07910.1 A. thaliana TAIR10 124249716 RNAligase 1 5268 Malvidae
Thhalv10006605m E. salsugineum v1.0 124249716 RNAligase 1 5268 Malvidae
Ciclev10027702m C. clementina v1.0 124249716 RNAligase 1 5268 Malvidae
Gorai.009G078900.1 G. raimondii v2.1 124249716 RNAligase 1 5268 Malvidae
Thecc1EG041088t1 T. cacao v1.1 124249716 RNAligase 1 5268 Malvidae
Cagra.1671s0411.1.p C. grandiflora v1.1 124249716 RNAligase 1 5268 Malvidae
Brara.I05332.1.p B. rapa FPsc v1.3 124249716 RNAligase 1 5268 Malvidae
Bostr.25219s0155.1.p B. stricta v1.2 124249716 RNAligase 1 5268 Malvidae
Manes.11G141000.1.p M. esculenta v6.1 124249716 RNAligase 1 5268 Malvidae
AL6G53580.t1 A. lyrata v2.1 124249716 RNAligase 2 5268 Malvidae
AL1G18200.t1 A. lyrata v2.1 124249716 RNAligase 2 5268 Malvidae
Carub.0011s0009.1.p C. rubella v1.1 124249716 RNAligase 2 5268 Malvidae