Gene : Carub.0011s0009 C. rubella v1.1
Defline:  (1 of 2) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase Genomic Order:  9
Name:  ? Carub.0011s0009 Secondary Identifier:  ? PAC:39250052
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0011s0009 0.5kb upstream 0.5kb upstream 12515 true scaffold_11: 197555-210069 Capsella rubella
Carub.0011s0009 0.5kb upstream 0.5kb upstream 500 false scaffold_11: 197555-198054 Capsella rubella
Carub.0011s0009 0.5kb downstream 0.5kb downstream 12515 true scaffold_11: 198055-210569 Capsella rubella
Carub.0011s0009 0.5kb downstream 0.5kb downstream 500 false scaffold_11: 210070-210569 Capsella rubella
Carub.0011s0009 1.0kb upstream 1.0kb upstream 13015 true scaffold_11: 197055-210069 Capsella rubella
Carub.0011s0009 1.0kb upstream 1.0kb upstream 1000 false scaffold_11: 197055-198054 Capsella rubella
Carub.0011s0009 1.0kb downstream 1.0kb downstream 13015 true scaffold_11: 198055-211069 Capsella rubella
Carub.0011s0009 1.0kb downstream 1.0kb downstream 1000 false scaffold_11: 210070-211069 Capsella rubella
Carub.0011s0009 2.0kb upstream 2.0kb upstream 14015 true scaffold_11: 196055-210069 Capsella rubella
Carub.0011s0009 2.0kb upstream 2.0kb upstream 2000 false scaffold_11: 196055-198054 Capsella rubella
Carub.0011s0009 2.0kb downstream 2.0kb downstream 14015 true scaffold_11: 198055-212069 Capsella rubella
Carub.0011s0009 2.0kb downstream 2.0kb downstream 2000 false scaffold_11: 210070-212069 Capsella rubella
Carub.0011s0009 5.0kb upstream 5.0kb upstream 17015 true scaffold_11: 193055-210069 Capsella rubella
Carub.0011s0009 5.0kb upstream 5.0kb upstream 5000 false scaffold_11: 193055-198054 Capsella rubella
Carub.0011s0009 5.0kb downstream 5.0kb downstream 17015 true scaffold_11: 198055-215069 Capsella rubella
Carub.0011s0009 5.0kb downstream 5.0kb downstream 5000 false scaffold_11: 210070-215069 Capsella rubella
Carub.0011s0009 10.0kb upstream 10.0kb upstream 22015 true scaffold_11: 188055-210069 Capsella rubella
Carub.0011s0009 10.0kb upstream 10.0kb upstream 10000 false scaffold_11: 188055-198054 Capsella rubella
Carub.0011s0009 10.0kb downstream 10.0kb downstream 22015 true scaffold_11: 198055-220069 Capsella rubella
Carub.0011s0009 10.0kb downstream 10.0kb downstream 10000 false scaffold_11: 210070-220069 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372835 5261 Brassicaceae View MSA
123834163 5264 Brassicales-Malvales View MSA
124339551 5266 SBM View MSA
124249716 5268 Malvidae View MSA
124065775 5270 Rosid View MSA
123748568 5271 Pentapetalae View MSA
122793340 5272 Eudicot View MSA
122047135 5273 Angiosperm View MSA
121347287 5274 Embryophyte View MSA
123428083 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain